Gene Pnuc_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0961 
Symbol 
ID5052675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp961701 
End bp962675 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content42% 
IMG OID640471126 
Producthypothetical protein 
Protein accessionYP_001155741 
Protein GI145589144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.78766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGTAA CTGCTTTACA TAAATTTCGC ACGGGATCAT TGCGAATTAT TGTTCTCGCA 
CTATTTCTCT CAATACTAGG ACACCTCATA CTATTTTTTG GCATCCCGTT TATTTCATTT 
AGTAATTCAC CCGAGCTTCC GGACGACTTA ATTATTAAAA CCGAATTGCG GATTGAGCCT 
CCTAAAAAAA TACAAATGTC TAAAGCACCC AAGAAGCGTA TTCCCACAAC CAACCAACAG 
GCATTAACAA CTACACCCAA TTCAAGCGTG GGTGAGCAGG GTGTAGATGG AAGTCAACGG 
GGTACCCCCT TTAAATTACC CGAATCAGGG ATTATTTATT ACGACTCTTA CGTTGATGGG 
CAAAAATATC AAACCGGTGA AATCGATTGG ATTACAGAAG GTAATAATTA CCGACTTTAT 
GTGAACATTC CCTACGCCTT TGTAGGTCCT TTTATATTTG AGTCACGTGG CTCAGTAGAT 
GCATATGGAA TTAGTCCAGC CATTTATTGG TCTCAACGAG GGGATCGCCC TCCACGTTAT 
TCAAGATTTG ATCGCGATGA AAAGGGAGGA GGGCAGATGT ATTTTTCAGA AAAGCCAGAC 
TTTTCACCCC CTATTATTCC TGGCACCCAA GATCGATTTA GTCTTATGTT TCAATTGGCT 
GCCTTATTAA ACGGTGATAG CAAAATTGAT GAGGCAGGTA GTCTGCGGGC TATTCCAGTT 
GTGGATTACA ACACTCTGGA GATATGGCAG TTCAAAAGCT ATGGTGAGAC TACCTCGGAA 
GATATTCCAA GCTTAGGAAA GGCTGTGAAT CGTCACTATG CACTCATGCA GCGTGAAAGT 
GACCCATATA AACGCCAGGT TGATATCTGG CTTGCTAAGG ACCTGGAGTG GCTTCCAGGC 
AGAATTCGAT CTGTGGAGTC CAATGGTCGG GTTCTAGAGC TGGTTTTTAA GCAAAAAAAT 
CCAGTGCAAA AATAA
 
Protein sequence
MFVTALHKFR TGSLRIIVLA LFLSILGHLI LFFGIPFISF SNSPELPDDL IIKTELRIEP 
PKKIQMSKAP KKRIPTTNQQ ALTTTPNSSV GEQGVDGSQR GTPFKLPESG IIYYDSYVDG 
QKYQTGEIDW ITEGNNYRLY VNIPYAFVGP FIFESRGSVD AYGISPAIYW SQRGDRPPRY 
SRFDRDEKGG GQMYFSEKPD FSPPIIPGTQ DRFSLMFQLA ALLNGDSKID EAGSLRAIPV 
VDYNTLEIWQ FKSYGETTSE DIPSLGKAVN RHYALMQRES DPYKRQVDIW LAKDLEWLPG 
RIRSVESNGR VLELVFKQKN PVQK