| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0955 |
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| Symbol | |
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| ID | 5053059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 957146 |
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| End bp | 958393 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471120 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_001155735 |
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| Protein GI | 145589138 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.230284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCTCAG CAGGAAAAAG AGTTGTAGTC ACAGGCCTGG GTGCAGTATC TGGACTTGGT
GTTGGTGCGG TAACTCAATT TCAAAAAGCC ATTGAATGTG TTTCTGGCAT ATCTGTATTT
AATACTCCAA CAGCAATACC TGTAGATTTA CAGTGCGCCG CTCTAATTAA GCAAGATCTG
GACTATGGCC TAGATTCCTC TTCATTGGGC ATGTTTGATA AGACTGCCCA CTTATCCTGG
TTTGTCGCGC ATGAGGCATT AAAGCAATCT GGCATTGAAA ATCTCAGCGA GTCAGAATTG
GATGCAAGCG GTATTTTCTG GGGTACTGGC TTTGGGGGGT CTAATACTTT AGATAGTGCC
TATCAAGATA TTTATCTCAA CAACAAAGGG CGTGCGCGGC CTTTTACGAT TATTGGGGTC
ATGGCTAATG GATCGGCTGC GTTGCTAGCC CTACAAACCG GCTTTACAGG TCCATCACTG
ACTTATTCAA CTGCATGCGC TTCATCTAGC CATGCTATTG GTGAAGCCTT TAGAAGTATT
AAGTATGGAT TTTGTGAGCG AGCAATTGCT GGTGGCGCAG AAAGTCTTTT TAACGCCGGA
CCCATTAAAG CTTGGGAAGC GTTAAGAACA CTTGCAACAC CGGATATGGA AGATCTTTCC
TCGTCGTGCA AACCGTTTTC AAAGAATAGA AGTGGATTTA TATTGGGTGA GGGTGCAGCG
GCCCTTGTCT TAGAATCCCT AGAAAGCGCT CAAAAGCGAG GTGCAAAAAT ATTGGGGGAG
ATAGTCGGGT ATGGCACGAG CACAGATGCT CGACACATCA CCAAGCCCGA TTCTGTTGGC
CAAGCAAAAG CAATTAAGGC GGCGCTTCTT GAAGCCCGAG TTAATTCTGA TCAAATTGCC
TATATCAATG CCCATGGTAC TGCCACACAG GTTGGTGACA TTGCTGAAAC AAATTCGATT
AAATCTGCCT TTGGGCTAAA TGCAGCAAAG GGGGTAGCGA TTAGTTCTAC CAAGGCAATT
CATGGGCATA CACTTGGAGC TGCTGGCGCG CTCGAGCTAG TCATTACTTT GCAAGCATTA
GAAAATAATA TCGCCCCGGG TACAGCCTTT TTACAAATTG CAGACCCAGA CTGTGATCTG
AATTATCTAC CCTTGAAATC TATTGAGAAG CCCATGTCAT TTGCAATGAG TAATTCATTT
GCTTTTGGAG GTTCTAACGC ATCTATTGTG GTTGCTAAGC TAGATTAA
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| Protein sequence | MSSAGKRVVV TGLGAVSGLG VGAVTQFQKA IECVSGISVF NTPTAIPVDL QCAALIKQDL
DYGLDSSSLG MFDKTAHLSW FVAHEALKQS GIENLSESEL DASGIFWGTG FGGSNTLDSA
YQDIYLNNKG RARPFTIIGV MANGSAALLA LQTGFTGPSL TYSTACASSS HAIGEAFRSI
KYGFCERAIA GGAESLFNAG PIKAWEALRT LATPDMEDLS SSCKPFSKNR SGFILGEGAA
ALVLESLESA QKRGAKILGE IVGYGTSTDA RHITKPDSVG QAKAIKAALL EARVNSDQIA
YINAHGTATQ VGDIAETNSI KSAFGLNAAK GVAISSTKAI HGHTLGAAGA LELVITLQAL
ENNIAPGTAF LQIADPDCDL NYLPLKSIEK PMSFAMSNSF AFGGSNASIV VAKLD
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