| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0946 |
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| Symbol | |
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| ID | 5053091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 949365 |
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| End bp | 950228 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471108 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001155726 |
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| Protein GI | 145589129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAT TCAAACTCTG TGGGTTCGAT GTTGGCCTAG ATCACCGTTT CTTTTTAATC
GCTGGCCCCT GCGTCATTGA ATCAGAACAA TCTGCCATTG ATATTGCAGG CGAGTTAAAA
GAAATTACCT CAGCATTAAA AATCCCCTTT ATTTATAAAT CCTCATTCGA TAAAGCCAAT
CGATCTTCAG GCACCTCATT TCGCGGCCTG GGGATGGAAA AAGGTTTGGA AATACTGGCG
AAGGTAAAGA AAGAAGTGGG CGTACCAGTA TTAACTGATG TGCATGACAT TGGCGAGATT
GCTGCAGTAG CAAAAGTAGT TGATGTCTTA CAAACCCCCG CTTTTTTATG CCGTCAAACA
GACTTTATTC GTGCCTGTGC CCAGAGCGGT AAGCCCGTGA ACTTTAAAAA AGGTCAATTT
CTTTCCCCTC ATGAAATGCT TAATGTGATT GAGAAGGCTC GTGGAGCCGC TGCAGAAATG
GGTTTGTCTG ATCAATTCAT GGTTTGTGAG CGCGGTGCTT CATTCGGCTA TAACAATCTT
GTTTCTGATA TGCGTAGCTT AGCCATTTTG CGCGAATCAA AGGCCCCGGT AGTCTTTGAT
GCAACGCATT CAGTGCAATT ACCTGGCGGC CAAGGAAATT CCAGCGGTGG TCAACGTGAA
TTCGTGCCGG TACTCGCTCG TGCAGCAGTC GCAGTCGGCA TTAGCGGTTT ATTTATGGAG
ACACATCCTG ATCCGGCAAA AGCTTTATCT GATGGACCCA ATGCTGTGCC ATTAAATCGC
ATGAAAGAAT TATTACAGTC TTTGGTGGAT ATTGATTCAG TCGTAAAAGC GAACAACTCT
TTTTTAGAAG ACAGCTTTAA GTAA
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| Protein sequence | MSTFKLCGFD VGLDHRFFLI AGPCVIESEQ SAIDIAGELK EITSALKIPF IYKSSFDKAN
RSSGTSFRGL GMEKGLEILA KVKKEVGVPV LTDVHDIGEI AAVAKVVDVL QTPAFLCRQT
DFIRACAQSG KPVNFKKGQF LSPHEMLNVI EKARGAAAEM GLSDQFMVCE RGASFGYNNL
VSDMRSLAIL RESKAPVVFD ATHSVQLPGG QGNSSGGQRE FVPVLARAAV AVGISGLFME
THPDPAKALS DGPNAVPLNR MKELLQSLVD IDSVVKANNS FLEDSFK
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