Gene Pnuc_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0940 
Symbol 
ID5052143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp939320 
End bp943357 
Gene Length4038 bp 
Protein Length1345 aa 
Translation table11 
GC content46% 
IMG OID640471102 
Productphosphoribosylformylglycinamidine synthase 
Protein accessionYP_001155720 
Protein GI145589123 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.54857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTT TCCACTTTTT ACCTGGCGCC GATGCGCTTT CTCCATTCCG TCAACAGAGA 
CTTTTGGCCA CTTTGGCAGC CCAAAGGATT GAGCTAGATT CTATTGAGGC CCAATACTTA
CATTTCATTT GGTCAGAGAC TCAATTAAGC CCTGAGAGTG AAGCTGTCTT GGCTAGCCTG
CTGACCTACG GACAGCCTTT TGCCTCCAAA ATCAATCAAG GTAAATCTTG GTTCGGAAAA
TCATCCGATG GGTTGCAGGG CGCTATTGTG ATTCCAAGAT TGGGCACGGT ATCTCCTTGG
GCAAGTAAGG CAACTGACAT TGCCCAGCAA TGCGCTCTTA ACGTATTGCG TTTAGAGCGC
GGCATACAGT TTTCCTGGAA ATCAAAAAAG AACTTAACTG CCGAGCAAAA TGAAATTGTT
TTAGCTGCAA TTCATGATCG CATGACAGAG GCTGTGATTG ATTCATTAGA GGCAGCTAAT
AATCTGTACC AATCGCTAGA TGACCGTCCA TTGACTCGCA TCCCAGTCTT ATCAGAAGGG
CGGACTGCAC TTGATAAAGC AAATCAAGAA TTGGGCTTAG CTTTATCCGA TGATGAAGTT
GCGTATTTGA CCGAGAACTT TATTCGCTTG GAGCGTAATC CTAGCGACGT TGAGTTAATT
ATGTTCGCGC AAGCTAATAG TGAACATTGC CGCCATAAAA TTTTCAATTC CAGTTGGACA
ATTGATGGTG ATGATCAAGA GCGCTCTTTG TTCTCCATGA TTCGTAACAC ACATCAACTT
CAGCCCGAAG GCACCATTGT TGCTTACTCT GATAACTCAG CAGTTATGGT GGGATGTGAG
GCTGAGACTT GGGTCCCTCA AGGTAAAGAG CAGCGCTATG AAAAAGATAC GCGTTTAGTT
CATACTTTAA TGAAGGTGGA GACTCATAAT CACCCAACTG CTATTGCACC GTTTCCTGGC
GCTTCAACTG GTGCAGGTGG AGAGATTCGC GATGAAGGGG CCACAGGTAT TGGTGGCCGC
CCTAAAGCTG GCTTAACGGG TTTCTCAGTA TCCAATTTAA ATATTCCCGG AACGAATTTT
CCATGGGAAA GCGAGTATTA CGGTAAGCCT GATCGCATAG CAACTCCTTT GCAGATCATG
ATTGATGGCC CACTTGGCGG CGCTGCATTT AATAATGAGT TTGGTAGGCC AATTCTGGGA
GGTTACTTCC GTGTTTTTGA GCAAACCCTA GAAGGCGTTC GTCGCGGCTA TCACAAGCCA
ATTATGATTG CGGGCGGTAT AGGTAGTATT GACTCTATTC ATACAGAGAA AAAGGCGATT
CAACCGGGAC ATTTGCTTAT TCAATTAGGC GGCCCTGGCA TGCGCATTGG TATGGGTGGC
GCTACAGGTA GCTCAGTTGC AACCGGTACG AACACCGCTG ATCTTGATTT TGATTCTGTA
CAAAGAGGTA ATCCAGAAAT GGAGCGTCGC GCGCAAGAGG TAATTAATGC TTGCCGTGCG
TTGGGTGTCA ATAATCCCAT AGTTTCTATT CATGATGTTG GAGCAGGTGG TTTATCTAAT
GCATTCCCTG AGCTAGCAGA TGGTGCTGGT TTAGGCGCTT CTTTTGAAAT GCGTAGCGTG
CCGCTTGAAG AAAGTGGTAT GAGCCCTGCC GAGATTTGGT GCAATGAATC TCAAGAACGC
TATGTTTTGG CAATTGAAGC TAAAGATTTG GAATTATTTA AATCGTTCTG TGAACGTGAG
CGTTGCCCTT TCTCTGTTGT AGGAGAAGCT ACTGCTGAAC GTCAGCTGAA ATTGAGCGAC
TCAAAACAAC CCACTAGTTC TGATACCTCA TACCCAATTG ATATGCCAAT GGAGGTGTTG
CTTGGTAAGC CTCCGCGTAT GCATCGTGAT GTAAAAAGAG TGCCACAAGA ATTTACAGAG
TTAAATGTTA CAGATGCTGA CTTGGCTCAA TCGGTCGCTT GGGTCCTGCA GCAACCAACA
GTCGCAAGTA AATCCTTCTT AATTACTATC GGTGATAGAA CGGTTGGCGG CTTGAATGCG
CGAGATCAGT TTGTTGGTCC ATGGCAAGTT CCTGTAGCCG ATTGCGCAGT GACTTTGATG
GATTACAAGG GTTATCGCGG TGAAGTAATG ACTATGGGTG AACGAACCCC TGTTGCAGTA
ATTAATGCGC CTGCAGCAGC ACGTATGGCA GTGGGTGAGG CCATCACCAA TTTATTGGCT
GCTGATATTT TGCGCCTGGA AGAAGTTAAG CTATCCGCTA ACTGGATGGC AGCATGTGGA
GCTCCAGGTG AAGACGCTAA GTTATATGAC TCTGTAAAGG CGGTGGGTAT GGAATTGTGC
CCAGCCCTAG GAATATCAAT TCCTGTTGGT AAGGATTCAT TGTCCATGGC TACCGCATGG
CAAGATGGTA ATGAAGCAAA GAAAGTAGTT TCCCCGGTTT CTCTCATCAT TTCTGCATTT
GCTTCTGTTC AGGATGTGCG CAAAACAAGC ACGCCGTTAC TTAAATTAAA ACATCCAGAT
GGTTCTAGCG TTGATAGCGA ACTTATTCTG ATTGATTTGG GTCGTGGCAA GAATCGAATG
GCAGGCAGCA TTCTTTCTCA GGTATTAAAT CAATCTGGCA ATACAGCCCC AGATCTGGAT
CATCCAGAAG ACCTCAAAGC ATTAGCCTCG GCAATCATTG AGCTGCGTAA AGAGGGAAAA
TTGCTGGCAT ATCATGATCG GTCAGATGGT GGCTTGCTTG CCTGCGTTGC TGAGATGGCA
TTTGCATCCC ACACTGGTGT CTCACTTAAC GTAGACATGA TTGCAGTTGA CGCTGGTCAG
GAACCTGATC ATGGTGATGC TAAAAATTGG GCGCAGCAAG TTTCTGGTCG TCGTCACGAG
CAAACAATGC GCGCACTCTT TAACGAAGAG TTGGGGGCAG TGATTCAGGT AAGAAGAGCT
GACCGCGATG CTGTGTTTGC AACGCTGCGT AAATTAGGCC TCAGCGCATT TAGCCATGTC
ATTGGTAAGC CTAACAATAA TGGCCATATT GAAATATGGC GGGATGCTAA AAAGATTTTT
GCTGAGCCAC GCGAACTTCT TCAAAAGATG TGGACCAATA CAAGCTATCA AATTGCCCGT
TTGCGTGACA ACCCAGTATG TGCAGATAGT GAATTCTCTT TATTGGATAA CCTGGCTGAC
CCAGGTATGT CGCCAAAGCT TACATTTGAC CCTAAAGAAG ATATTGCGGC CCCATTCATT
CAGAAAAATG CTCGACCTAA GGTAGCTATA TTACGAGAGC AGGGCGTTAA CTCTCATGTG
GAAATGGCTT ATGCAGTCAA TTGGGCTGGT TTTGATAGTT ATGACGTGCA CATGTCTGAC
TTATTGACTG GCAAAGCTAG GTTGGACGAT TTCCGCGGGT TAATTGCTTG CGGTGGATTT
AGTTATGGTG ATGTCTTGGG TGCAGGTGAA GGTTGGGCTA AAACCATTCT TTTTAATCAA
CAGCTACGTG ATCAGTTTTC AAGCTTCTTC GCTCGCCAAG ATAGCTTTGC CTTAGGCGTC
TGTAACGGTT GCCAAATGAT GAGTAATCTT TCAGGAATTA TTCCTGGTGC GGAAGCTTGG
CCTAAATTTA CTCGCAATCA ATCTGAACAA TATGAAGCAC GCTTGGTAAT GGCTGAAGTA
CTATCTTCCC CCTCCATTTT TACGCAAGGA ATGGAAGGTA GCCAGTTGCC TATTGCTATA
GCTCACGGTG AAGGCTTTGC TAACTTTAGT CAGCAAGGAA ATATAGAGCA AATCGCTAAG
GAAGGCTTAG CTGCATTACG ATTTGTTGAT CATCAGGGTA ATCCAACTGA AACCTATCCA
ATGAACCCAA ACGGGTCACC AAACGGTTTG ACAGGCGTTA CCACGCCTGA TGGTCGATTT
ACGGTCATGA TGCCCCATCC TGAACGTGTA TTCCGTGCAG CACAAATGAG CTGGTGTCCT
CCTGAGTGGC TAGAAGTTCC GGATGGCGCA AGTCCGTGGT TACGTCTATT CCGTAACGCT
CGTCGCTGGG CTCAATAA
 
Protein sequence
MSFFHFLPGA DALSPFRQQR LLATLAAQRI ELDSIEAQYL HFIWSETQLS PESEAVLASL 
LTYGQPFASK INQGKSWFGK SSDGLQGAIV IPRLGTVSPW ASKATDIAQQ CALNVLRLER
GIQFSWKSKK NLTAEQNEIV LAAIHDRMTE AVIDSLEAAN NLYQSLDDRP LTRIPVLSEG
RTALDKANQE LGLALSDDEV AYLTENFIRL ERNPSDVELI MFAQANSEHC RHKIFNSSWT
IDGDDQERSL FSMIRNTHQL QPEGTIVAYS DNSAVMVGCE AETWVPQGKE QRYEKDTRLV
HTLMKVETHN HPTAIAPFPG ASTGAGGEIR DEGATGIGGR PKAGLTGFSV SNLNIPGTNF
PWESEYYGKP DRIATPLQIM IDGPLGGAAF NNEFGRPILG GYFRVFEQTL EGVRRGYHKP
IMIAGGIGSI DSIHTEKKAI QPGHLLIQLG GPGMRIGMGG ATGSSVATGT NTADLDFDSV
QRGNPEMERR AQEVINACRA LGVNNPIVSI HDVGAGGLSN AFPELADGAG LGASFEMRSV
PLEESGMSPA EIWCNESQER YVLAIEAKDL ELFKSFCERE RCPFSVVGEA TAERQLKLSD
SKQPTSSDTS YPIDMPMEVL LGKPPRMHRD VKRVPQEFTE LNVTDADLAQ SVAWVLQQPT
VASKSFLITI GDRTVGGLNA RDQFVGPWQV PVADCAVTLM DYKGYRGEVM TMGERTPVAV
INAPAAARMA VGEAITNLLA ADILRLEEVK LSANWMAACG APGEDAKLYD SVKAVGMELC
PALGISIPVG KDSLSMATAW QDGNEAKKVV SPVSLIISAF ASVQDVRKTS TPLLKLKHPD
GSSVDSELIL IDLGRGKNRM AGSILSQVLN QSGNTAPDLD HPEDLKALAS AIIELRKEGK
LLAYHDRSDG GLLACVAEMA FASHTGVSLN VDMIAVDAGQ EPDHGDAKNW AQQVSGRRHE
QTMRALFNEE LGAVIQVRRA DRDAVFATLR KLGLSAFSHV IGKPNNNGHI EIWRDAKKIF
AEPRELLQKM WTNTSYQIAR LRDNPVCADS EFSLLDNLAD PGMSPKLTFD PKEDIAAPFI
QKNARPKVAI LREQGVNSHV EMAYAVNWAG FDSYDVHMSD LLTGKARLDD FRGLIACGGF
SYGDVLGAGE GWAKTILFNQ QLRDQFSSFF ARQDSFALGV CNGCQMMSNL SGIIPGAEAW
PKFTRNQSEQ YEARLVMAEV LSSPSIFTQG MEGSQLPIAI AHGEGFANFS QQGNIEQIAK
EGLAALRFVD HQGNPTETYP MNPNGSPNGL TGVTTPDGRF TVMMPHPERV FRAAQMSWCP
PEWLEVPDGA SPWLRLFRNA RRWAQ