Gene Pnuc_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0937 
Symbol 
ID5052911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp936481 
End bp937944 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content44% 
IMG OID640471099 
Producthypothetical protein 
Protein accessionYP_001155717 
Protein GI145589120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.86082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA CCGTCCGTAA GCATCAAAAG TTACTCCAAA TAGTTCTGAT GCTTTTTATC 
GTTCCATCCT TTGTGATGTT CGGAATTTCG AGCTATTCCG GTTTTTTGGA TAAAGAAACT 
GACTTGGTAA AAGTAAACGG GAAACCCATT ACTGCACAAG AGGTTGATTC AGCGGCAAAG 
CGTCAGGCTG AGCGAGTTGG AGGAAACATT CAGATTGCCC AAAGCTTGCA ATTTAGACAG 
GCAATTTTGA ATGAATTGTT ACAACAGCGC ATCTTAGGAT TTGCTGTCAT CAACTTACGC 
TTGCAAGTAG GCAAAGAAGC CTTGATCAAA AGCTTGCAAA ATATTCCGCA GATACGTGCT 
TTATACCGTC AAGATGGTAG TTTTGATGAT GTCCGCTTCA AGCAGCTGTT AGCAAGCAAT 
GGTTTGAATG AAGAGCAGTT TTATGCAAGC CAAGCATTTG ATCTCAAGAT TAGTCAATTT 
GTGAACTCTG TAGCGCGGAC CGAATTACCT ACACCCAAAC TATCTGAAAT CGTATCAACT 
CTTTATGAGA CGGAAAGACA GGTCCAATCC TTATCTTTTG ATGCCAAAGA GTATATAAAC 
AAAGTTAACC CAACTCAGGA AGAGTTGCAG GCTTTCTACA ATGCGAATAC GAAATTATTT 
GAAAGCCCTG AATACATTGA TGTTGAATAC ATTGTCCTGA AAGCCGATCC TAAGGAGGAT 
GCCAAAGGGT TTAGCGCAAA AGCGGATCAG TTCGCTAATA TGACTTACGA TCAGGCTGAT 
AGTCTTAAGC CAGCTGCCGA CAAGCTTAAA TTATCGATTC AAACCCAAAA GGGCATCACT 
CGCTCAGGTC CTAGTGGCGC ATCCAAAGAT AATCCCTTAG CTAATCCTAA GGTAGTTCAA 
TCTCTATTTG GTGATGATGC AGTCAAAAAT AAACGCAATA TTGAGGCAAT CCAGACTTCA 
CCGGGCGTAT TTGTTTCCGC TCGCGTTGTG ACTTTTCATC CAGCACAAAT CTTGCCTTAT 
AAAGAAGTGG CAACTGAGGT GAAGCGTCAG GTAAGCCAAC GTGCTGCAGA AAAATTGGCT 
ATTGCTGCAG CTGCTGAGCG CTATGCAAGC TTGCAAAAAG ATCCTAAGCT TGCAACTGGA 
TTTGCGGCGC CGATTTGGGT ATCCCGCAAT AAACCAGCCA ATTTGGTCGG CCTAGCTTTG 
GATGATGTGA TGTCCGTTAA TACCAACCAA TTGCCTGCAA TTGTCTCTGT TGCTAACCCA 
GGAGTTGGGA CAACGCTTTA TCGAGTAGAT CAGGTGCGAC AACCTGCTGG CGTAGATGCC 
AAGGCTCATA AAGCACAAGC TCAACAAATT CAAGCACTCT CCGCTCAATC TGAATTTGCT 
GGCTTTATGG CGTATTGGCG TGATGCTGCT AGCGTGAAAG TCATCAACCC ATTGAAACCA 
GTTTCCACTG GAGCGGGTAG TTAA
 
Protein sequence
MFDTVRKHQK LLQIVLMLFI VPSFVMFGIS SYSGFLDKET DLVKVNGKPI TAQEVDSAAK 
RQAERVGGNI QIAQSLQFRQ AILNELLQQR ILGFAVINLR LQVGKEALIK SLQNIPQIRA 
LYRQDGSFDD VRFKQLLASN GLNEEQFYAS QAFDLKISQF VNSVARTELP TPKLSEIVST 
LYETERQVQS LSFDAKEYIN KVNPTQEELQ AFYNANTKLF ESPEYIDVEY IVLKADPKED 
AKGFSAKADQ FANMTYDQAD SLKPAADKLK LSIQTQKGIT RSGPSGASKD NPLANPKVVQ 
SLFGDDAVKN KRNIEAIQTS PGVFVSARVV TFHPAQILPY KEVATEVKRQ VSQRAAEKLA 
IAAAAERYAS LQKDPKLATG FAAPIWVSRN KPANLVGLAL DDVMSVNTNQ LPAIVSVANP 
GVGTTLYRVD QVRQPAGVDA KAHKAQAQQI QALSAQSEFA GFMAYWRDAA SVKVINPLKP 
VSTGAGS