| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0935 |
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| Symbol | clpX |
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| ID | 5051987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 932216 |
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| End bp | 933577 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471096 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001155715 |
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| Protein GI | 145589118 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.702505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGATA CCACCGGCAC TAATTCTTCT GAAAAAGTTT TGTATTGTTC TTTTTGCGGC
AAAAGCCAGC ATGAAGTAAA AAAGCTTATT GCAGGCCCTT CTGTATTTAT CTGCGATGAG
TGTATTGATT TGTGCACCGA TATTATTCAA GAAGAAATTG CTAAGTTGCC GAAAGAAGAG
GGTGATGAGT CTTTACCTAC TCCTCATGAA ATTCGTGGGA ATTTAGATCA ATACGTTATT
GGCCAGGAGC ACGCTAAAAA AACTTTGGCG GTAGCGGTAT ATAACCACTA TAAGCGCTTG
CAATACCTAC CTAAGCCAAA AAAAGAGAAG CTGGATAAGG ATGGTAAGCC TGTAGAGGCT
TCAGATAAGA AAGAGTCTAA GTTACCAGCC AAGGCTATTG TGGATGGCGT GGAATTGGCA
AAAAGTAATA TTTTGCTTAT CGGACCAACA GGCTCAGGTA AGACTTTGTT GGCTCAAACT
TTGGCGCGCA TGCTAGATGT CCCTTTTGTC ATGGCTGATG CAACTACCTT GACCGAAGCA
GGTTATGTTG GTGAAGACGT TGAAAATATC ATCCAGAAGT TATTACAAGC TTGTGACTAC
AACGTAGAAA AAGCGCAGCG CGGTATTGTC TATATTGATG AGATTGATAA AATTTCTCGC
AAGTCAGATA ACCCATCTAT CACCCGTGAT GTATCCGGTG AGGGCGTTCA ACAAGCATTG
CTGAAATTAG TCGAAGGCAC TATGGCCTCC GTACCACCTC AAGGTGGTCG CAAGCACCCT
AATCAAGACT TCTTGCAAGT GGATACCACC AATATTTTGT TTATCTGCGG CGGTGCTTTT
GACGGCCTTG AAAAAGTGAT TCAGCAACGT ACTGCTAAAA CAGGCATTGG TTTTAATGCA
ACTGTCCCTG GCAAAGATGA GCGTGGCGTA AGTGATTTAT TGATTGAGGT TGAGCCAGAA
GATTTAATTA AGTTTGGTTT GATTCCAGAA TTAATTGGCC GTTTGCCAGT GGTTGCCACT
TTAGCGCAAT TGGATGAAGA AGCCTTGATA CAGATTTTGA CTGAGCCTAA GAATGCCTTG
GTAAAACAAT ATCAAGCACT TCTCACAATG GAAGGCTCAG AACTAGAAGT GCGTCGCGAG
GCCCTATCTG CAATTGCTAA AAAGGCGATT GCCCGAAAAA CTGGTGCTCG CGGCCTCAGA
TCTATCCTTG AAGGCTCCTT AATGGATGTA ATGTATGACT TGCCATCCCT AAAGAATGTT
CAAAAGGTTG TTATAGATGA ATCCAGCATT GCTGAAGGTG GAAAGCCTTT ATTGGTCTAT
AAACAGGATC TGGATCAACC AGATATGAGC AAAAAAGCCT AA
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| Protein sequence | MSDTTGTNSS EKVLYCSFCG KSQHEVKKLI AGPSVFICDE CIDLCTDIIQ EEIAKLPKEE
GDESLPTPHE IRGNLDQYVI GQEHAKKTLA VAVYNHYKRL QYLPKPKKEK LDKDGKPVEA
SDKKESKLPA KAIVDGVELA KSNILLIGPT GSGKTLLAQT LARMLDVPFV MADATTLTEA
GYVGEDVENI IQKLLQACDY NVEKAQRGIV YIDEIDKISR KSDNPSITRD VSGEGVQQAL
LKLVEGTMAS VPPQGGRKHP NQDFLQVDTT NILFICGGAF DGLEKVIQQR TAKTGIGFNA
TVPGKDERGV SDLLIEVEPE DLIKFGLIPE LIGRLPVVAT LAQLDEEALI QILTEPKNAL
VKQYQALLTM EGSELEVRRE ALSAIAKKAI ARKTGARGLR SILEGSLMDV MYDLPSLKNV
QKVVIDESSI AEGGKPLLVY KQDLDQPDMS KKA
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