| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0930 |
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| Symbol | |
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| ID | 5052503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 928064 |
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| End bp | 928816 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471090 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001155710 |
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| Protein GI | 145589113 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCTG GAAATCTAGT AACCGCAAAA TGCCACGCAC TCTTGCCAAC AGGTGGGGCT
GGTACTCGTC TAGGAGGCGA TCTGCCCAAG CAATTTCAGC AATTAGCTGG AAAACCGATG
CTAGCCTATG CGATAGAAGC TTTCATGGAA AGTCCTCAGA TCGAGTCTAT TTGGATTGGG
GTTGCCCCAG GATTCATCGA CAACCCCATT CTGAAAGGTT TGGCAAAAGG GAAGAAGCCT
GTCCATTTCT TGCCTACTGG CGGACCCACA CGTCAAGAGA CTGTTCGCAA TACCCTGGGG
GCTCTTTTAG AGGCTGGTAT CTCTATAAAT GATTGGGTCC TGGTTCATGA CGCAGCAAGG
CCCGGCGTAA CAGCAGAGCT GATAAAAAAA TTAATTGATT CTGTGCAAGG CAGTCATGTC
GGAGGATTGC TAGCGATGCC GCTTGCTGAT ACTTTAAAAA AGGCAGATTT AGATTCGGTA
ATCGCAGGCA ATATTCCACA TTCAGAAAAA ACAATTTCAC GTGAACATTT GTGGCAAGCA
CAAACCCCAC AAATGTTTGG TCTTAAGACA TTACACGATG CTTTAGAAGA GGCTATACGT
CAGGAGGCCG ATATCACCGA TGAAGCTAGT GCGATGGAAT TGTCTGGATT TAAACCTTTA
CTGATTGAAG GTGCCACCCG TAACTTCAAG GTTACCCATC CAGCTGATTG GGAATTAATG
CAATTACTTC TCCATTCCTT GTCGAAAAAA TAA
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| Protein sequence | MSSGNLVTAK CHALLPTGGA GTRLGGDLPK QFQQLAGKPM LAYAIEAFME SPQIESIWIG
VAPGFIDNPI LKGLAKGKKP VHFLPTGGPT RQETVRNTLG ALLEAGISIN DWVLVHDAAR
PGVTAELIKK LIDSVQGSHV GGLLAMPLAD TLKKADLDSV IAGNIPHSEK TISREHLWQA
QTPQMFGLKT LHDALEEAIR QEADITDEAS AMELSGFKPL LIEGATRNFK VTHPADWELM
QLLLHSLSKK
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