| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0926 |
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| Symbol | rimO |
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| ID | 5052301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 920922 |
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| End bp | 922280 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471086 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001155706 |
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| Protein GI | 145589109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGGGA AAATTGGTTT TGTATCCTTG GGATGCCCCA AGGCTTTAGT TGATTCTGAA
CTCATCCTCA CTCAACTGAG TGCTGAGGGC TATGAAACTG CTAAAGACTA TTCAGGCGCT
GATCTTGTTG TTGTTAATAC TTGTGGCTTT ATTGATTCAG CAGTAGAGGA GAGTCTTTCC
GCTATCGGAG AAGCGCTTGC TGAAAATGGC AAGGTAATTG TGACGGGTTG TTTGGGTGCA
AGGAAAAATG CTGATGGCTC AGATTTGATT CTGAGCATTC ACCCTAAAGT CCTTGCAGTT
ACAGGCCCGC ATGCTACTGA TGAGGTAATG CAAGCTATTC ACCTGCATTT ACCCAAACCC
CATGATCCGT TTACCGATTT AGTGCCGCCA GCCGGTGTAA AACTCACGCC AAAACATTAC
GCGTATTTAA AAATTTCTGA AGGATGCAAC CATCGATGCA CCTTCTGCAT TATTCCGAGT
CTTCGTGGTG ATTTGGTTTC AAGACCGATA GGTGAGGTTT TGTTAGAAGC CAAACGTCTG
TTTGAGTCAG GCGTAAAAGA GTTGCTAGTG GTCTCTCAAG ATACCAGTGC TTATGGTGTT
GATATTCAAT ACCGTACAGG TTTTTGGGAT GGTAAGCCTG TTAAAACGCG TATGTTCGAT
TTGGTCAATG CATTAAATCA AATTGCACGA GAACATCAGG CTTGGGTACG CTTACATTAC
GTTTATCCAT ACCCACATGT GGATGATATT TTGCCTTTGA TGGCCGAATT CTCAGAACAT
GGCTATGGAG TATTGCCTTA TTTAGATATC CCTTTGCAGC ATGCACATCC CGATGTTCTC
AAAAGAATGA AGCGACCAGC AAGTGGCGAG AAAAATTTAG AACGTATTTT GGCTTGGCGT
GAAGCATGCC CAGACTTGGT AATACGTAGT ACCTTCATCG CAGGATTCCC TGGTGAAACT
GAAGAGGAGT TTGAGTACCT TCTTAATTTC TTGGAAGAAG CGCAAATTGA TCGTGCAGGT
TGCTTTGCAT ACTCTCCAGT AGAGGGTGCG AAAGCAAATG AATTAGATAA TCCGGTGCCA
GATGCTGTTC GAGAGGAGCG CCGAGCACGT TTTATGGCTA AGGCTGAGGA TATTTCGATC
AAGCGACTTG CTAAAAAAAT AGGCAAAAGA GTTCAGGTGC TCATTGACCG CGTAGATGAA
TCTGGCGGAA TTGGTCGAAC CATAGGAGAT GCACCCGAAA TTGATGGCCT AGTGAGGGTT
TTACCCCCAA CCAAACCTTC AAAACGCTAT CGTACTGGAG AAATCATCCG TGCAACCGTC
ATTAGCTCCC AAGGGCATGA CCTAATAGCA GAAACTTGA
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| Protein sequence | MVGKIGFVSL GCPKALVDSE LILTQLSAEG YETAKDYSGA DLVVVNTCGF IDSAVEESLS
AIGEALAENG KVIVTGCLGA RKNADGSDLI LSIHPKVLAV TGPHATDEVM QAIHLHLPKP
HDPFTDLVPP AGVKLTPKHY AYLKISEGCN HRCTFCIIPS LRGDLVSRPI GEVLLEAKRL
FESGVKELLV VSQDTSAYGV DIQYRTGFWD GKPVKTRMFD LVNALNQIAR EHQAWVRLHY
VYPYPHVDDI LPLMAEFSEH GYGVLPYLDI PLQHAHPDVL KRMKRPASGE KNLERILAWR
EACPDLVIRS TFIAGFPGET EEEFEYLLNF LEEAQIDRAG CFAYSPVEGA KANELDNPVP
DAVREERRAR FMAKAEDISI KRLAKKIGKR VQVLIDRVDE SGGIGRTIGD APEIDGLVRV
LPPTKPSKRY RTGEIIRATV ISSQGHDLIA ET
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