| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0922 |
|---|
| Symbol | |
|---|
| ID | 5053068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 916930 |
|---|
| End bp | 917715 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640471082 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001155702 |
|---|
| Protein GI | 145589105 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATG AGCAAAATAA AAACCCATAT TTCTTGTTAC CGCAGTGGAA GACGCCACAC
CGGGTGCATG CCAAGATATC AACTAGAAAC GGCGGTTTAA GTCAGGCACC TTATGACTCT
CTGAATTTGG GTTTGCATGT TGGTGACTCA ATGAAAGCTG TTTTAGCTAA TAGGACATTA
GTTTCTCAAT GCCTGCCAGC AGAGCCTCTA TGGCTTGATC AAACTCACAG CACAGTAGTG
AGCACTCCAG TAAAACGTAA AACCAATACA GCAATGCCGA TTGCAGCTGA TGCCATTGTT
ACGAATATCC CAAACGAGGT GTTGGCTATC ATGACGGCCG ATTGTTTGCC TGTTTTATTC
GCTAGCTCTA GCGGTACTGA AGTTGGGGCA GCACATGCAG GGTGGCGTGG CCTATGCTCA
GGTGTTTTGG AAAATACCGC TCACGAACTG TTGGCGCTCA ATCCACAACT TAAGCCACAA
GATTTAGTTA CTTGGATGGG TCCGGCGATT GGTCCAAAGC GTTTTGAGGT TGGTCAGGAT
GTACTGGACT CTTTTAAAGC TAGCCACATT CCTTTTCCTG AAGAGGCATT TAAATCCATT
GCAGATAGGC CAGGCAAATA TTTAGCCGAT ATTTATGCCT TAGCCCGCAG TCGATTACAT
GCTTTTGGAA TTACCCAAAT TTATGGGGGT GATTTCTGTA CGGTTTCAGA GTCTGAGCAA
TATTTTTCTT ATCGCCGAGA TGGCGTAACT GGAAGATTTG CCAGTTTTAT CTGGATTGCA
GGTTAA
|
|---|
| Protein sequence | MMDEQNKNPY FLLPQWKTPH RVHAKISTRN GGLSQAPYDS LNLGLHVGDS MKAVLANRTL
VSQCLPAEPL WLDQTHSTVV STPVKRKTNT AMPIAADAIV TNIPNEVLAI MTADCLPVLF
ASSSGTEVGA AHAGWRGLCS GVLENTAHEL LALNPQLKPQ DLVTWMGPAI GPKRFEVGQD
VLDSFKASHI PFPEEAFKSI ADRPGKYLAD IYALARSRLH AFGITQIYGG DFCTVSESEQ
YFSYRRDGVT GRFASFIWIA G
|
|---|
| |