| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0921 |
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| Symbol | |
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| ID | 5053232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 915977 |
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| End bp | 916933 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640471081 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001155701 |
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| Protein GI | 145589104 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGTG AACGCCTGGA CAAGGTGTTG GCTGGATCTT TGCCTGATTA TTCCCGTAAT
CGGCTCAAGG CTTGGGTTGA AGCTGGCGCA GTTATGGTTG ATGGAAAAGT CACCAAAGCC
AGATATTTAT TGAGGGGGGG CGAGAGTGTT AAGGTATTTC CTCAAGAAAT GCCTGAACAA
TTTGCCTTTA GCCCCGAAAA CATCCCTTTG GAGGTGGTTT ACGAGGATGA CTCCATCATT
GTGATTAACA AGCCGCCGGG ATTGGTGGTA CATCCTGCTG CAGGCAACTG GTCAGGCACC
TTATTAAATG GCCTCTTACA CCGTTTTCCA GAGTTAAAGT CTCTGCCACG CGCAGGTATT
GTTCATCGTC TCGATAAGGA TACGTCAGGA CTAATGGTAG TGGCACGTAC CGCTCACGCC
CAAACCGCAT TGGTTAGGCA GTTGCAAGAG CGAACGGTGG GTCGAAGATA TCTAGCTTGG
GTTTGGGGTG ATGCGCCCAG CCAGGGCAAG GTGTTGGCCT CGGTAGGTCG TGATCAACGA
GATCGCTTAA AAATGGCTGC TGGCAGTCCT CAGGGTAAGC CGGCGGCTAC TTTGTTTAGA
CGAATCGCTA AAGGAAACGT AGAAAATGCT CCAGTGGCTT TATTGGAGTG TCGTTTGGAA
ACAGGGCGAA CCCATCAAAT CCGCGTTCAT CTTGAGTCTT TAGGGTTTCC TTTGGTGGGT
GACCCGGTAT ATCGCAAGAA AGCGCCGGGA GTTGCCAAAG CCCTATCCTT TGATCGTCAG
GCGCTACATG CTTTTGCTCT GAGCCTACAG CATCCCGTTA CCCAAGAATT GCAAACTTGG
TTTCGTTTGC CACCCGTTGA TCTAATTAAC CTACTACCTC AAGTCGGCAT GTCCACGCAT
GATTTGCCTG AAGAAGGGGT TGTCTTAGCA TCTATCAAGA ATGAAGTACG GGCATGA
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| Protein sequence | MAGERLDKVL AGSLPDYSRN RLKAWVEAGA VMVDGKVTKA RYLLRGGESV KVFPQEMPEQ
FAFSPENIPL EVVYEDDSII VINKPPGLVV HPAAGNWSGT LLNGLLHRFP ELKSLPRAGI
VHRLDKDTSG LMVVARTAHA QTALVRQLQE RTVGRRYLAW VWGDAPSQGK VLASVGRDQR
DRLKMAAGSP QGKPAATLFR RIAKGNVENA PVALLECRLE TGRTHQIRVH LESLGFPLVG
DPVYRKKAPG VAKALSFDRQ ALHAFALSLQ HPVTQELQTW FRLPPVDLIN LLPQVGMSTH
DLPEEGVVLA SIKNEVRA
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