| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0920 |
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| Symbol | |
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| ID | 5053758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 914985 |
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| End bp | 915872 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471080 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001155700 |
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| Protein GI | 145589103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACG TAATATCAGA CGCCAGTTTA AGGCTTGCTG GACCCTCTTC ACCCCAAAGA
GGCTTTTCAG CCATTTTTAG TCGCACTTTT GCACTACTTT TAGCAATCAT TTTTGCACTC
ATCCTACTTG GCGGATGCGC AGGTAGCGAG GGCAAAAAAG ACGACACCGA TATTTGGCCA
GAAGCAAAGC TCTACTCTGA AGCTACCGAC AAAATGAATG ATGCGGATTT TGCGAAATGC
GGTAAATATT TTGAAAAACT AGAGGCGCGC TTTCCTTTTG GGCCGTATTC TCAACAAGCT
CAAATTAATT CTGCTTATTG CTATTGGAAA GCCCAAGAGC AGGCGCAAGC ATTAATTGCC
ATTGATCGCT TCATCAAATT GCATCAAGGC AGTCCAACAT TGGATTATGC GTATTACCTC
AAAGGCTTGA TCACATTTAA TGATGATTTA GGCTGGCTAG GTAATTTCAC CGGCCAAGAT
CTCAGCGAAC GAGACCCTAA GGCAGCAAAA GAAGCCTTCG AATCTTTTAA GACTGTTGTA
GATCGCTTCC CAGATAGTAA ATATGCACCC GATTCATTGG ATCGAATGCG CTATATCGTG
AATTCTTTAG CTGAAGCTGA TGTCAATGTG GCTCGCTTCT ACTATCAACG CGGGGCCTAT
TTAGCCTCTG CAAACCGCGC TCAGCTGGTA ATCCGCGACT ATGATCGTGC ACCCGCCGTT
GAGGAGGCCC TCTATATTTT AGTGAAATCC TATGAGAAGC TAGGGCTGAC ACAACTTAGC
AATGACTCGG CCCGGGTATT TGCCTTGAAC TTCCCAGATA GCACAATGCT AGAGACAGGT
CAGCGGGTAA AAAAAGAAGT TAAATGGTGG CAGTTCTGGA ATAAGTAA
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| Protein sequence | MSDVISDASL RLAGPSSPQR GFSAIFSRTF ALLLAIIFAL ILLGGCAGSE GKKDDTDIWP
EAKLYSEATD KMNDADFAKC GKYFEKLEAR FPFGPYSQQA QINSAYCYWK AQEQAQALIA
IDRFIKLHQG SPTLDYAYYL KGLITFNDDL GWLGNFTGQD LSERDPKAAK EAFESFKTVV
DRFPDSKYAP DSLDRMRYIV NSLAEADVNV ARFYYQRGAY LASANRAQLV IRDYDRAPAV
EEALYILVKS YEKLGLTQLS NDSARVFALN FPDSTMLETG QRVKKEVKWW QFWNK
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