Gene Pnuc_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0918 
Symbol 
ID5053131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp912420 
End bp913739 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content45% 
IMG OID640471078 
Productlysophospholipid transporter LplT 
Protein accessionYP_001155698 
Protein GI145589101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA GTTTTTACAT CATTATGGCG GCGCAATTTT TTTCGTCGCT GGCTGATAAC 
GCCCTGCTCA TAGCAGCAAT AGCCCTCTTG GCCCAGCTTA ACGCACCGGC CTGGATGACG 
CCTTTGCTCA AATTATTCTT TGTATTGTCC TATGTTCTGC TTGCAGCCTT TGTGGGAGCC 
TTTGCAGACT CCAGACCTAA AGGCAATGTC ATGTTCATTA CCAATACGAT TAAGTTCGTG 
GGTTGCGTGG TAATGCTGTT TGGTAGTCAC CCCCTTTTTT CGTATGCCAT TGTCGGTTTG 
GGGGCCGCGG CTTACTCCCC TGCCAAATAT GGAATATTGA CTGAACTACT CCCCCCAGAA 
AAATTAGTGG CTGCAAATGG TTGGATTGAG GGACTCACGG TAAGCTCCAT TATTTTGGGT 
ACAGTGCTAG GTGGCGTATT AATTAGTGCT TCCGTTTCGC AAAGTCTACT GTCGATTGAC 
ATACCCAATG TGACCACCGG AATTGATACA CCGGCTGAAT CAGCCATTCT CATCATCATG 
ATGATTTATG TGATTGCGGC ACTCATTAAC CTCAAGATTC CAGATACCGG CGCACGCTAC 
GTGTCTCAAA AGACCAATCC GATTGAGTTA ATCAAAGACT TTTCTGTATG TTTTAAAACC 
TTATGGAATG ATCGTCTTGG GCAAATCTCT TTAGCTGTCA CCACTTTGTT TTGGGGTGCA 
GGCGCCACCT TGCAATTTAT CGTGATTAAG TGGGCACAAG TAGCACTTCA TATGACGCTC 
TCCCAAGGCG CTATTTTGCA AGCCATTTCT GCAGTTGGAG TGGCTATTGG CGCTGTCTAC 
GCAGCATGTA GTGTGCCCCT TAGAAAGTCT TTGAAAGTCC TGCCATACGG CATTGTGATG 
GGCTTAGTGG TTTGTGTGAT GGCGATTTAT AACTCTGATA TGCTGCCTAA CACCAGTTTA 
TTTGCTATCG GCAAATTTCA GATTTCATTA AATCTTATTC CGGCGTATTT CTTATTGGTT 
TTGGTTGGCT GTTTGGCTGG TTACTTTGTA GTTCCCATGA ATGCCCTCTT ACAACATCGC 
GGCCACGTAT TGATGTCCGC TGGACATTCT ATTGCCGTGC AGAACTTTAA TGAAAACATT 
TCTGTATTAG CGATGTTAGC TATCTACTCA TTACTAATTT GGTTGGATCT TCCAGTTCAG 
TCTGTCATTA TTGGATTCGG CCTGGTAGTC AGCGTCATTA TGTGGTTAGT CATTAAACGT 
CATGCACGTA ACCAAGCGGA ATATGACTCA ATGCATCTCA TCGGCGAACA CAAGCACTAA
 
Protein sequence
MNRSFYIIMA AQFFSSLADN ALLIAAIALL AQLNAPAWMT PLLKLFFVLS YVLLAAFVGA 
FADSRPKGNV MFITNTIKFV GCVVMLFGSH PLFSYAIVGL GAAAYSPAKY GILTELLPPE 
KLVAANGWIE GLTVSSIILG TVLGGVLISA SVSQSLLSID IPNVTTGIDT PAESAILIIM 
MIYVIAALIN LKIPDTGARY VSQKTNPIEL IKDFSVCFKT LWNDRLGQIS LAVTTLFWGA 
GATLQFIVIK WAQVALHMTL SQGAILQAIS AVGVAIGAVY AACSVPLRKS LKVLPYGIVM 
GLVVCVMAIY NSDMLPNTSL FAIGKFQISL NLIPAYFLLV LVGCLAGYFV VPMNALLQHR 
GHVLMSAGHS IAVQNFNENI SVLAMLAIYS LLIWLDLPVQ SVIIGFGLVV SVIMWLVIKR 
HARNQAEYDS MHLIGEHKH