Gene Pnuc_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0908 
Symbol 
ID5053941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp902056 
End bp902421 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content45% 
IMG OID640471068 
Productcytochrome c, class I 
Protein accessionYP_001155688 
Protein GI145589091 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.413276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG CTCTAGTTAC CGCAGTTTTG CTGTCCAGTA TCGGTCTTGT CAACGTAGCC 
AATGCAGCAA GCATTGATAA GGGGCAGGCT TTAGTTGAGA AAGGTAATTG TGTTTCATGT 
CACGGCGCTG GTCTGAATGC ACCAATCATG CCCACATACC CTAAGCTCGC CGGTCAATAC 
CCAGATTATC TTTATTACGC TTTGAAGGCA TATGAAGTGG GTGATACAAA TCACTTATAC 
GGTCGCAATA ACGCCACCAT GTCCTCCCTT ATTAAGGCGC AAACAACGCC TTTAACAGAC 
CAAGATTTGC GTGACATCGC TGCTTACATT GCTTCCTTAC CAGGGAACTT TGTTATCAAG 
AAGTAA
 
Protein sequence
MKLALVTAVL LSSIGLVNVA NAASIDKGQA LVEKGNCVSC HGAGLNAPIM PTYPKLAGQY 
PDYLYYALKA YEVGDTNHLY GRNNATMSSL IKAQTTPLTD QDLRDIAAYI ASLPGNFVIK 
K