| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0894 |
|---|
| Symbol | |
|---|
| ID | 5053332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 885431 |
|---|
| End bp | 885628 |
|---|
| Gene Length | 198 bp |
|---|
| Protein Length | 65 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640471053 |
|---|
| Product | thiamine biosynthesis protein ThiS |
|---|
| Protein accession | YP_001155674 |
|---|
| Protein GI | 145589077 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0249295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTAA TCATCAATCA GGTCGAGTAT GAGCTACCCA GTCAGAGCGT GATCACAGAT
GCACTATCGA TGATTGATGC AAAGCCACCC TATGCAGTTG CAGTGAATCT CAATTTTGTG
CCTAAAACTA AACATATTGA ATTTCGCTTA AATGAAAATG ACCAAATTGA AGTAATAGCA
CCTGTTACAG GCGGCTAA
|
|---|
| Protein sequence | MRVIINQVEY ELPSQSVITD ALSMIDAKPP YAVAVNLNFV PKTKHIEFRL NENDQIEVIA
PVTGG
|
|---|
| |