| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0892 |
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| Symbol | |
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| ID | 5052420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 883650 |
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| End bp | 884576 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471051 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001155672 |
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| Protein GI | 145589075 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000295383 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAA TACGTGACCT TGCCGATCAA ATCGTGTCAG CCCATCGCAA AGATGATATT
TGTCTGCCTA TTCCGGACTA CACACTCAAT ACACCGCCCC CACGAATTGA TAATGAGTCG
GCTGCAGATC TTAACGAACT GGCCGCTACC TTAGCTGCTA TCGAAATGGG CTTTATTGAG
AAGGATGCCA AGACGATAGG TAAGGCCTGG TCCCGTATGG TTTTGCAAGA CGGTGGATTT
GATCCTTTCA AGTGGCCTAG CCGACCTGAG CATTTTGATT TACTCCCGTG GACCCGCAAT
ATGAATCCCA AGGCATTTAA AGAGTGTCCA AAACGCTTGG GACTCTATGG CGTGATGCCG
GATGCCGACT GGGTTAAACG GATGGTCGAA GCAGAAATTC CCACAGTGCA ATTGCGTTTT
AAATCTGAAG ATCGCTACAA AATCCGTAAA CAAATTCGAG AATCTGTAAA GGCTACTGAA
GGCAGCAAAA CTCTCCTTTT TATTAATGAT TATTGGGAAG AAGCAATCGA TGCAGAGGCC
TATGGTGTTC ATTTAGGCCA AGAAGATATG GAAACTGCTG ACCTTGAAGC AATACGCTCT
GCTGGTTTGA GGTTAGGTTT GAGTACGCAT GGCTATGCTG AGATGGTGTA TGCAGATCGT
TTTTGCCCCA GCTATATTGC GATGGGCGCA GTATTCCCAA CTAATTTGAA AAAAATGCCA
ACAGCACCTC AAGGTTTGGG CCGTCTTTAT AAATATGCGC AGTTAATGAA TCACTATCCA
CTGGTAGCAA TTGGTGGCAT CGATGAAAGC AGTATTCATG CAGTAGTGAA AAGTGGAGTA
GGCTCAGTTG CTGTAGTGCG GGCCATCACG CAGACCAAAG ACCCCAAGGC GGCAGTTAAG
CACTTACAAG AATTGATGCG AGCTTAA
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| Protein sequence | MSLIRDLADQ IVSAHRKDDI CLPIPDYTLN TPPPRIDNES AADLNELAAT LAAIEMGFIE
KDAKTIGKAW SRMVLQDGGF DPFKWPSRPE HFDLLPWTRN MNPKAFKECP KRLGLYGVMP
DADWVKRMVE AEIPTVQLRF KSEDRYKIRK QIRESVKATE GSKTLLFIND YWEEAIDAEA
YGVHLGQEDM ETADLEAIRS AGLRLGLSTH GYAEMVYADR FCPSYIAMGA VFPTNLKKMP
TAPQGLGRLY KYAQLMNHYP LVAIGGIDES SIHAVVKSGV GSVAVVRAIT QTKDPKAAVK
HLQELMRA
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