| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0883 |
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| Symbol | |
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| ID | 5053095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 874686 |
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| End bp | 876362 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471041 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001155663 |
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| Protein GI | 145589066 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00018941 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATGA ATCCCTCTAG GTCTTGGCAT CAGAACTATC CAGAAGGAGT ACCAAGCGAG
ATTGGTCCGC TCAGTCATGC TTCCGTAGCA GATTTTCTGA CAGAATGCTT TGGGCATTTC
GAAAATCGTA AAGCAGTTGA GGCAATGGGA ACGTACTTTT CCTATCGCGA ACTGGATCGT
TTATCACTAA ACTTTGCAGC GTATTTGCAA ACTCTAGAAC TTGAGAAGGG TGCACGGGTT
GCGCTCATGT ACCCAAATGT CATTGAGTAT CTGGTGGCCA TGATTGGTAC CTTGCGCGCA
GGGTATGTGG TCGTCAATAT CAACCCACTT TATACCTCTA GAGAGCTGGA ATCTCAACTT
TTAGATAGTG GTGCTTCTGT TCTAGTGTTG ATGGAGAACT TTGCGGCTAC TTATGAACAA
ATTGCCGAGC AGGTTACTTT AAAGAAGGTG CTTGTTAGTA GCCCCGGAGA GCTTTTGGGT
CTTAAGGGTG TCATTGTGAA CTGGGTTGCA CGCAATATTA AGCACCTCAT TCCAGAATGG
AGTTTTCCAT GCATCCACCT GAAAGAAGCT TTAAAGATTG GCAGTCAGCA TCAGTTTGTG
CAACCCCAGA TTGGCTTAAA CGATATTGCT TTTTTGCAGT ACACCGGCGG TACTACGGGT
GTCTCTAAAG CGGCTGTCTT ATTACACCGA AATATTCTTT CTAATGTCTT ACAAATTGAA
ACGTGGCTTA GACCTGGCCT CAAGCATCAA AGTCATCAAC AATTGCAGTT TCTATGTGCT
CTGCCAATGA CTCATATTTT TGCATTGACA GCATGTGCAC TGTTAGGAAT TTCACAAGGC
GCTTTATTGG TTTTGGTTGC AAATCCTCGG GACATTGATG GCTTTATTAA GTTATTAAAA
AAACATCCGG GAATTAATAT TTTCCCTGGC GTGAATACCT TATTTCATGC GCTTGTACAT
CGGCCAGAAT TTAAACAAGT AAAACTTCCG AACTTAATGA TCACTATTGG CGGGGGGATG
GCAGTTCATA AAACTACCGC TGATCATTGG CAGGCTTTAA CTGGTGTTCC TATAGCTCAG
GGCTATGGAT TATCGGAAAC ATCGCCTGTC GTTTGTGTAA ATAGCCCACT AGAAAAGCAT
TTCACTGGCC ATATTGGCGT GCCGATGCCA AGTACTGACA TTGTGATTTT GGACGATGAT
GAAGTTGAGT TACCACAAGG CACTCCTGGC GAAATAGCAA TTAAAGGCCC TCAGGTCATG
GCCTGCTATT GGAATAAGCC AGAAGAGACG CGCCACTCTA TGACAGCCGA TGGCTACTTT
AAATCAGGTG ATATAGGACT CATTACCCCA GAGGGGTTCA TACAAATTGT CGATCGTAAG
AAAGACATGA TAGTAGTGGC GGGATTTAAA GTATTTCCGA ATGATGTGGA GGATGTGCTT
ACAGGCATGC CTGGTATTCG AGAGTGTGGC GTTATTGGCG CACCTCATCG CAAGCTAGGC
GAGATTGTGA AAGCCTATAT CGTCAAAGAC AACCACCACT TAAGTGAGTC GGATGTGATG
CAGTACTGCA AAGAGCATCT CACCAGCTTT AAGAGGCCTA GAAGGATCAT CTTTGTGCAT
CAACTTCCCA AGTCCAATGT TGGGAAAATC TTACGTCGCG AACTAAGGAA TCTCTAA
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| Protein sequence | MYMNPSRSWH QNYPEGVPSE IGPLSHASVA DFLTECFGHF ENRKAVEAMG TYFSYRELDR
LSLNFAAYLQ TLELEKGARV ALMYPNVIEY LVAMIGTLRA GYVVVNINPL YTSRELESQL
LDSGASVLVL MENFAATYEQ IAEQVTLKKV LVSSPGELLG LKGVIVNWVA RNIKHLIPEW
SFPCIHLKEA LKIGSQHQFV QPQIGLNDIA FLQYTGGTTG VSKAAVLLHR NILSNVLQIE
TWLRPGLKHQ SHQQLQFLCA LPMTHIFALT ACALLGISQG ALLVLVANPR DIDGFIKLLK
KHPGINIFPG VNTLFHALVH RPEFKQVKLP NLMITIGGGM AVHKTTADHW QALTGVPIAQ
GYGLSETSPV VCVNSPLEKH FTGHIGVPMP STDIVILDDD EVELPQGTPG EIAIKGPQVM
ACYWNKPEET RHSMTADGYF KSGDIGLITP EGFIQIVDRK KDMIVVAGFK VFPNDVEDVL
TGMPGIRECG VIGAPHRKLG EIVKAYIVKD NHHLSESDVM QYCKEHLTSF KRPRRIIFVH
QLPKSNVGKI LRRELRNL
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