Gene Pnuc_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0878 
Symbol 
ID5053665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp872562 
End bp872918 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content45% 
IMG OID640471036 
Productprotein of unknown function DUF883, ElaB 
Protein accessionYP_001155658 
Protein GI145589061 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000255055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTA AAAAATCTGA GCATTTAGAA GAAGTCGAGC ATGCTGCAAT GAATAAGGTA 
TCTGCAGGTG CAGATCAGCT TATTGGTGAA TTTAAGTCTT TAATGGCTGA CGCAGAAGCC
TTAATTAAGG CTACAGAAGA CCATCCTGGT GAAACTCTAA ACTCAATACG CAATAAAGCC
CTAGAAACGC TTACAAATGC CAAGGCAAGT TTGTCAGGGG TTGAGGGTAA GTTAGCCGAT
AAGGCAAGAG AAGTTGCTGA TGGTGCTGAT GACTTTGTTC ACCGTAACCC CTGGGAAGCT
GTTGGGGTAG CAGCAGGCGT CGGTCTATTG CTTGGTCTTT TTATGCGTCG TCGCTAG
 
Protein sequence
MTTKKSEHLE EVEHAAMNKV SAGADQLIGE FKSLMADAEA LIKATEDHPG ETLNSIRNKA 
LETLTNAKAS LSGVEGKLAD KAREVADGAD DFVHRNPWEA VGVAAGVGLL LGLFMRRR