Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0872 |
Symbol | |
ID | 5053092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 867749 |
End bp | 868942 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471030 |
Product | Formyl-CoA transferase |
Protein accession | YP_001155652 |
Protein GI | 145589055 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00148474 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCCAT TATTTAATCT GAAGGTAGTT GAAATGGGGC AGCTTATCGC CGGTCCCTTT GCAGCCAAGA CGCTGGCAGA TTTTGGTGCT GATGTCATCA AGATAGAGCC GCCTAAGGTA GGCGATGCCT TGCGTAAGTG GCGTCTTCTT AAAGATGGAA CTTCAATTTG GTGGCAAGTT CAGTCACGCA ATAAACGTTC ACTCTCTTTA GATTTAAAAC AAGCCGAAGC ACAAGATATT GTGCGAACTC TTTTAAAAGA AGCTGATGTC TTAATTGAAA ATTTTCGCCC AGGCACTTTA GAGGGATGGG GCCTTGATCC AGAAAAGTTA CTCGAACTCA ATCCCAAGTT AATTGTTTTA CGAATTAGTG GCTACGGTCA AACTGGCCCG TATCGTGACA AGCCTGGATT TGGAGTGGTA GCTGAGGCGA TGGGTGGCTT ACGCCACTTA ACTGCCGAGC CGGGACGCGT GCCAGTGCGT GTAGGAATCA GTATTGGCGA TACTCTGGCA TCACTGCATG GAGTAATTGG TATATTACTT GCGCTTCAAG AGCGACACCA AAGCGGCAAG GGCCAGATTA TTGATATCGC TTTATATGAA GCAGTCTTTA ATTGTATGGA AAGTCTATTA CCGGAATACA GTGCATTTGG TGAGGTGCGA CAAGCTGCGG GTAGCGCGTT GCCCGGCATC GCCCCAACGA ATGCCTATCT CTGTAGTGAT GGTGGATACG TATTGATTGC TGGTAATGGC GATAGTATTT TCAAGCGCTT AATGACGGTA ATAGGCCGAG AAGACTTAAG TAGTGATCCT GAGCTAGAAA ATAATGATGG ACGCGTTAAA CGGGTTGCTG AGTTAGATCA AGCGATTGGT GAGTGGGCTA AATTACTGAA TACTGACAAA GTATTGGCAG CGTTAGATTC AGTAGCAGTT CCAGCAGGAC GTATCTATAC AGTGGTCGAT ATTGCCAATG ACCCACATTA CAGGGCTAGA GAAAATATTC AAAGCATCAA AATGGCTGAC GGGTCTACCC TAGATGTTCC AGGTGTAATA CCTAAGCTAT CTCGCACCCC GGGATCCATT AAGACACTAG CCCCTCAAAT TGGTGAGAAT ACCGATGAAA TTCTCAAAAG CATTGGTTTG AGCGAGTCAC AGGTCGCTTC ATTAAAAGAG CGCGGTGTCG CCTTTACTAA GTAG
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Protein sequence | MEPLFNLKVV EMGQLIAGPF AAKTLADFGA DVIKIEPPKV GDALRKWRLL KDGTSIWWQV QSRNKRSLSL DLKQAEAQDI VRTLLKEADV LIENFRPGTL EGWGLDPEKL LELNPKLIVL RISGYGQTGP YRDKPGFGVV AEAMGGLRHL TAEPGRVPVR VGISIGDTLA SLHGVIGILL ALQERHQSGK GQIIDIALYE AVFNCMESLL PEYSAFGEVR QAAGSALPGI APTNAYLCSD GGYVLIAGNG DSIFKRLMTV IGREDLSSDP ELENNDGRVK RVAELDQAIG EWAKLLNTDK VLAALDSVAV PAGRIYTVVD IANDPHYRAR ENIQSIKMAD GSTLDVPGVI PKLSRTPGSI KTLAPQIGEN TDEILKSIGL SESQVASLKE RGVAFTK
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