| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0872 |
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| Symbol | |
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| ID | 5053092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 867749 |
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| End bp | 868942 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471030 |
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| Product | Formyl-CoA transferase |
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| Protein accession | YP_001155652 |
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| Protein GI | 145589055 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00148474 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCAT TATTTAATCT GAAGGTAGTT GAAATGGGGC AGCTTATCGC CGGTCCCTTT
GCAGCCAAGA CGCTGGCAGA TTTTGGTGCT GATGTCATCA AGATAGAGCC GCCTAAGGTA
GGCGATGCCT TGCGTAAGTG GCGTCTTCTT AAAGATGGAA CTTCAATTTG GTGGCAAGTT
CAGTCACGCA ATAAACGTTC ACTCTCTTTA GATTTAAAAC AAGCCGAAGC ACAAGATATT
GTGCGAACTC TTTTAAAAGA AGCTGATGTC TTAATTGAAA ATTTTCGCCC AGGCACTTTA
GAGGGATGGG GCCTTGATCC AGAAAAGTTA CTCGAACTCA ATCCCAAGTT AATTGTTTTA
CGAATTAGTG GCTACGGTCA AACTGGCCCG TATCGTGACA AGCCTGGATT TGGAGTGGTA
GCTGAGGCGA TGGGTGGCTT ACGCCACTTA ACTGCCGAGC CGGGACGCGT GCCAGTGCGT
GTAGGAATCA GTATTGGCGA TACTCTGGCA TCACTGCATG GAGTAATTGG TATATTACTT
GCGCTTCAAG AGCGACACCA AAGCGGCAAG GGCCAGATTA TTGATATCGC TTTATATGAA
GCAGTCTTTA ATTGTATGGA AAGTCTATTA CCGGAATACA GTGCATTTGG TGAGGTGCGA
CAAGCTGCGG GTAGCGCGTT GCCCGGCATC GCCCCAACGA ATGCCTATCT CTGTAGTGAT
GGTGGATACG TATTGATTGC TGGTAATGGC GATAGTATTT TCAAGCGCTT AATGACGGTA
ATAGGCCGAG AAGACTTAAG TAGTGATCCT GAGCTAGAAA ATAATGATGG ACGCGTTAAA
CGGGTTGCTG AGTTAGATCA AGCGATTGGT GAGTGGGCTA AATTACTGAA TACTGACAAA
GTATTGGCAG CGTTAGATTC AGTAGCAGTT CCAGCAGGAC GTATCTATAC AGTGGTCGAT
ATTGCCAATG ACCCACATTA CAGGGCTAGA GAAAATATTC AAAGCATCAA AATGGCTGAC
GGGTCTACCC TAGATGTTCC AGGTGTAATA CCTAAGCTAT CTCGCACCCC GGGATCCATT
AAGACACTAG CCCCTCAAAT TGGTGAGAAT ACCGATGAAA TTCTCAAAAG CATTGGTTTG
AGCGAGTCAC AGGTCGCTTC ATTAAAAGAG CGCGGTGTCG CCTTTACTAA GTAG
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| Protein sequence | MEPLFNLKVV EMGQLIAGPF AAKTLADFGA DVIKIEPPKV GDALRKWRLL KDGTSIWWQV
QSRNKRSLSL DLKQAEAQDI VRTLLKEADV LIENFRPGTL EGWGLDPEKL LELNPKLIVL
RISGYGQTGP YRDKPGFGVV AEAMGGLRHL TAEPGRVPVR VGISIGDTLA SLHGVIGILL
ALQERHQSGK GQIIDIALYE AVFNCMESLL PEYSAFGEVR QAAGSALPGI APTNAYLCSD
GGYVLIAGNG DSIFKRLMTV IGREDLSSDP ELENNDGRVK RVAELDQAIG EWAKLLNTDK
VLAALDSVAV PAGRIYTVVD IANDPHYRAR ENIQSIKMAD GSTLDVPGVI PKLSRTPGSI
KTLAPQIGEN TDEILKSIGL SESQVASLKE RGVAFTK
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