Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0864 |
Symbol | |
ID | 5053930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 858200 |
End bp | 859507 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471024 |
Product | HipA domain-containing protein |
Protein accession | YP_001155646 |
Protein GI | 145589049 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAATA CCACTAAGGA TCTTTTTGTC TTTGCCAATC TTGATGGTGA ATTTGTACCA GCAGGACAAC TGCAAGTAGA TGAGGAAGGC TCAAGACTTA TTGCCTCATC ATTTGCTTAT GGCTTGCGTT ACTTAGATAG GAGCAACGCA CAAGAAGTGG ATCCAGTCGC CCTTAGTCTT AGGAATAAAA GAGAGATCAA AGGCAAACGC CTCGTTCCAC CTAATGGCTT AGAGGCCTTT GGTGGAATTC GGGATGCTGC TCCTGATTCC TGGGGAAGAA GAGTGATTGA AGCTAGGCTT AAGGTTCCAG CCAATAGCCT TCCAGAATCA ACCTATCTAC TCGAAGCAGG TAGTGATCGT GTTGGGGCTT TAGACATTCG ATCTTCTTTA GATCAAGAGG AGTGCCCTGC TCACGAAAGT ATACACAATC TGTCATACGT ACTCGAGGGT GCGCAAAAGA TTGAGGCGGG CTTGCCAGTA TCAGAAGCAC TATCCAGAAT TTTGATTGTG GGTAGCGGTC TTGGGGGCAT GCGCCCTAAG GCAAGCGTGC GCGATGATGA AAACATTTTA TGGATGGCTA AGTTTCCAGG CAACAATGAT GGCGCTTTAG ATGTGCCGAG CATTGAATAC GCCACACTCA AACTTGCGCA GTTAGCCGGT CTTAATGTAG CGCAAACTCA ATTAGAACAA GTTGGCAAGA AAAAAGTGTT GATGGTCAAA CGCTTTGATC GCTCTTGGAC TGCTTTTGCT CGGCCAGTAG AAATTCGTCA TCATGTCGTT AGCGCCCTCA CCTTAGTTGC CTGTCACGAA TCAGAATCCA ACACAAAAAG CTATATGGAT ATTGCGGATA CCATCCGCAG ATATTGCGTG GTTCAAACAG TCAAAGCTGA TATTGAAGAA CTATATGCAC GCATGATCTT TAATATTTTT GTTAGTAACG ATGATGATCA TCTACGCAAT CATGCATTCT TATGGAATCA TAAGCTTAAA GGCTGGAGTC TAAGTCCACT CTATGATGTG ATGCCTCATG CGGTCATTGC AAGTGAGCGT TATCAACATC TAGGCGTTGG ACCTCAAGGT AAATTGGCCA CGCTCGATAA TGCCTACGGT GCTAAAGAGC GCTTCGGCCT ATCTGCGCAG CAAGCAAGCT CCATTATCGA TCGCGTATGG CGAGTAACCA GGCAATGGAA AACGCACTTT GAAAGCCTTG GAATTGTTGC AGATCAAATC GAAGGAATCT CTCTAGCCTT TAGGCGTATC GATGATATTT GCAGCCCTGA ATTAATCAAG ACCCTAGCCA AAAACTAA
|
Protein sequence | MANTTKDLFV FANLDGEFVP AGQLQVDEEG SRLIASSFAY GLRYLDRSNA QEVDPVALSL RNKREIKGKR LVPPNGLEAF GGIRDAAPDS WGRRVIEARL KVPANSLPES TYLLEAGSDR VGALDIRSSL DQEECPAHES IHNLSYVLEG AQKIEAGLPV SEALSRILIV GSGLGGMRPK ASVRDDENIL WMAKFPGNND GALDVPSIEY ATLKLAQLAG LNVAQTQLEQ VGKKKVLMVK RFDRSWTAFA RPVEIRHHVV SALTLVACHE SESNTKSYMD IADTIRRYCV VQTVKADIEE LYARMIFNIF VSNDDDHLRN HAFLWNHKLK GWSLSPLYDV MPHAVIASER YQHLGVGPQG KLATLDNAYG AKERFGLSAQ QASSIIDRVW RVTRQWKTHF ESLGIVADQI EGISLAFRRI DDICSPELIK TLAKN
|
| |