Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0861 |
Symbol | |
ID | 5052193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 854369 |
End bp | 855697 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471020 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001155643 |
Protein GI | 145589046 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTT CAAGGAAATC ACAGTCAAAG CTTAAGTCGC AAAAACGAAT TGCGGTCGCC CTCAGTGGTG GCCTCGATTC GGTTGTATTG CTCGACACTG TTTGCAAAGC GCAAACAACA TACAAAGACT CTCCCACAGA AATCTGGGCT TTTCATATTC ATCATGGTTT GCAAAAGCCG GCGGATGATT GGCTTATCTT TTGCGAAAAG CTCGCAAAAA AATACAAGAT TGGTTTTGAC TTTCGCTTGC TACACCTCGC TCAAGATACA GATCAGGGTA ATGTAGAGGC GAGAGCAAGG GCTGGGCGTT ATGAGGCTTT AGCAGAGCTC TGTGTTGAGT ATGGTATTGG GGATTTACTA TTGGCGCACC ATCAAAACGA TCAAGCAGAA ACAGTGTTGC TGCAATTGTT ACGGGGTGCT GGCGTAGCCG GCTTATCTGG CATGCCTCAT GAGCGCGAGC TTACTCATGA TCAAAGCCGC ATTACGCTTT GGCGCCCTTT ACTGAATCAA AGCAGGGCTG AGTTAGAGGT CTATGCAAAG GCAAATAAGC TTAAATGGAT TGAAGATCCG AGCAATCAGA AGACTCAATT TCGTCGTAAT GCAATTCGTA AGCAGATTAT TCCTCGCTTA GAAAAAATTC AGCCAGCAGC AGTTGCTAAT TTAGCGCGTA GTGCAAACCT CATGAGTGAA GCGCAAGCTT TGTTAGACCG ACTCGCTAAA GAGGACGGTA AATCAATACT ACTTAAAGAT GGCGTAGCGA TAAAGCCATT ACTCATTTTG GCTCAGTCGG ATCTGGGAGC AGCCAATAAT GTTGTGCGTT ATTGGCTAAA AACACATCAG TTGGGTATGC CTTCACAAGA ACGCTTGCAA GCATGGTGGC TTGATTTACA AAATACAAGG CAAGATGCTC AGCTTGAGTG GCTTCATGAT GGAGTGAGTC TGAGAGTATG GCGTGGCCAC TTACAGGCCA TCACCAAGAC TTCTGGACGG TGGATTTTTC AAGCCATTCC TAGCAAAAGT CAAAGACTAG GCTTAGCTGC CGCATGGGTA AAAAATGCCC AAGAAAATGG ACGGGTGGAG TTCCGCATGC GGTCTGGTTC AGAAAAAATC CAAATCAAAC CCAATAGTCC ACGCAAAACC CTCAAAAACC TGTTCCAGGA GAGCGATATC CCGCCTTGGC AGCGTCAGGC ACCTTTGCTC TATATCGAGG GCGATCTCAT TGCTGTGGCT GGTATTGGCC CCAGCCATCC CCATCTAGTC AATTCTGGCG CGCGAGTTTG GCCGGAGTGG CAAGAGAGTG CTTTGCCGTT ACAAAACCCT GTAAAATAA
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Protein sequence | MASSRKSQSK LKSQKRIAVA LSGGLDSVVL LDTVCKAQTT YKDSPTEIWA FHIHHGLQKP ADDWLIFCEK LAKKYKIGFD FRLLHLAQDT DQGNVEARAR AGRYEALAEL CVEYGIGDLL LAHHQNDQAE TVLLQLLRGA GVAGLSGMPH ERELTHDQSR ITLWRPLLNQ SRAELEVYAK ANKLKWIEDP SNQKTQFRRN AIRKQIIPRL EKIQPAAVAN LARSANLMSE AQALLDRLAK EDGKSILLKD GVAIKPLLIL AQSDLGAANN VVRYWLKTHQ LGMPSQERLQ AWWLDLQNTR QDAQLEWLHD GVSLRVWRGH LQAITKTSGR WIFQAIPSKS QRLGLAAAWV KNAQENGRVE FRMRSGSEKI QIKPNSPRKT LKNLFQESDI PPWQRQAPLL YIEGDLIAVA GIGPSHPHLV NSGARVWPEW QESALPLQNP VK
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