Gene Pnuc_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0861 
Symbol 
ID5052193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp854369 
End bp855697 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content47% 
IMG OID640471020 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001155643 
Protein GI145589046 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTT CAAGGAAATC ACAGTCAAAG CTTAAGTCGC AAAAACGAAT TGCGGTCGCC 
CTCAGTGGTG GCCTCGATTC GGTTGTATTG CTCGACACTG TTTGCAAAGC GCAAACAACA
TACAAAGACT CTCCCACAGA AATCTGGGCT TTTCATATTC ATCATGGTTT GCAAAAGCCG
GCGGATGATT GGCTTATCTT TTGCGAAAAG CTCGCAAAAA AATACAAGAT TGGTTTTGAC
TTTCGCTTGC TACACCTCGC TCAAGATACA GATCAGGGTA ATGTAGAGGC GAGAGCAAGG
GCTGGGCGTT ATGAGGCTTT AGCAGAGCTC TGTGTTGAGT ATGGTATTGG GGATTTACTA
TTGGCGCACC ATCAAAACGA TCAAGCAGAA ACAGTGTTGC TGCAATTGTT ACGGGGTGCT
GGCGTAGCCG GCTTATCTGG CATGCCTCAT GAGCGCGAGC TTACTCATGA TCAAAGCCGC
ATTACGCTTT GGCGCCCTTT ACTGAATCAA AGCAGGGCTG AGTTAGAGGT CTATGCAAAG
GCAAATAAGC TTAAATGGAT TGAAGATCCG AGCAATCAGA AGACTCAATT TCGTCGTAAT
GCAATTCGTA AGCAGATTAT TCCTCGCTTA GAAAAAATTC AGCCAGCAGC AGTTGCTAAT
TTAGCGCGTA GTGCAAACCT CATGAGTGAA GCGCAAGCTT TGTTAGACCG ACTCGCTAAA
GAGGACGGTA AATCAATACT ACTTAAAGAT GGCGTAGCGA TAAAGCCATT ACTCATTTTG
GCTCAGTCGG ATCTGGGAGC AGCCAATAAT GTTGTGCGTT ATTGGCTAAA AACACATCAG
TTGGGTATGC CTTCACAAGA ACGCTTGCAA GCATGGTGGC TTGATTTACA AAATACAAGG
CAAGATGCTC AGCTTGAGTG GCTTCATGAT GGAGTGAGTC TGAGAGTATG GCGTGGCCAC
TTACAGGCCA TCACCAAGAC TTCTGGACGG TGGATTTTTC AAGCCATTCC TAGCAAAAGT
CAAAGACTAG GCTTAGCTGC CGCATGGGTA AAAAATGCCC AAGAAAATGG ACGGGTGGAG
TTCCGCATGC GGTCTGGTTC AGAAAAAATC CAAATCAAAC CCAATAGTCC ACGCAAAACC
CTCAAAAACC TGTTCCAGGA GAGCGATATC CCGCCTTGGC AGCGTCAGGC ACCTTTGCTC
TATATCGAGG GCGATCTCAT TGCTGTGGCT GGTATTGGCC CCAGCCATCC CCATCTAGTC
AATTCTGGCG CGCGAGTTTG GCCGGAGTGG CAAGAGAGTG CTTTGCCGTT ACAAAACCCT
GTAAAATAA
 
Protein sequence
MASSRKSQSK LKSQKRIAVA LSGGLDSVVL LDTVCKAQTT YKDSPTEIWA FHIHHGLQKP 
ADDWLIFCEK LAKKYKIGFD FRLLHLAQDT DQGNVEARAR AGRYEALAEL CVEYGIGDLL
LAHHQNDQAE TVLLQLLRGA GVAGLSGMPH ERELTHDQSR ITLWRPLLNQ SRAELEVYAK
ANKLKWIEDP SNQKTQFRRN AIRKQIIPRL EKIQPAAVAN LARSANLMSE AQALLDRLAK
EDGKSILLKD GVAIKPLLIL AQSDLGAANN VVRYWLKTHQ LGMPSQERLQ AWWLDLQNTR
QDAQLEWLHD GVSLRVWRGH LQAITKTSGR WIFQAIPSKS QRLGLAAAWV KNAQENGRVE
FRMRSGSEKI QIKPNSPRKT LKNLFQESDI PPWQRQAPLL YIEGDLIAVA GIGPSHPHLV
NSGARVWPEW QESALPLQNP VK