| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0853 |
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| Symbol | |
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| ID | 5052412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 847436 |
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| End bp | 848188 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640471012 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001155635 |
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| Protein GI | 145589038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCG ATCAATCCCA ATTCCTTCGC TGGGTACTAG TCGAGACCAG CCACCCCGGA
AATGTCGGAT CAGCAGCTCG AGCACTCAAG ACAATGGGTT TTCACGATTT ACGCTTAGTA
AATCCAAAGA CCCTAGACAT CAGCACTCAA GCCGAAGCAA TTGCCTTAGC AAGTGGTGCA
GTCGATGTTC TGGAGACTGC TACAGTCTCA GGATCCTTGG AAGATGCGGT ACAAAACTGT
TCTTTAGTCC TAGGCCTTAC TAGCAGAGAT CGTGAATTTG GCCCTCCCGC TCTAGATTGG
GAGTCTGCCC GAGCACTGAT TTCAGAAACC GTGGCCAATC AAGGTCAAGT GGCCATGGTA
TTTGGGACCG AAAGAACTGG GCTAGAAAAC GAACATCTTG CTTTATGCAC TCATCGCGTC
TGGCTGAACG CTAATCCTGA CTACCCCTCC TTAAACCTAG CTCAAGCCCT CATGGTGTGC
GCATATGCGC TCAGAGAGAC CTTTGAAAAC CGTACTCAAA CCACCCTCAC GTCAGCGGAT
ATCAATGACG GCGTTGATTT TGCCGACCCT ATTGCCGTAG CAGCCATGCT CGAGCACTGG
CGAGAGGGTT TAGAGGCAAT TGGTTATCTA GATCCAGCCC ACCCTAAGAA GCTAATGCCC
CGCTTCCAGG CTTTATTTGC CCGCAGCCGC TTGCGTAAGG AAGAAATCGA TCTATTGCGA
GGCATCGCCA AACAGATGCT TCTGAGAAAA TAA
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| Protein sequence | MNIDQSQFLR WVLVETSHPG NVGSAARALK TMGFHDLRLV NPKTLDISTQ AEAIALASGA
VDVLETATVS GSLEDAVQNC SLVLGLTSRD REFGPPALDW ESARALISET VANQGQVAMV
FGTERTGLEN EHLALCTHRV WLNANPDYPS LNLAQALMVC AYALRETFEN RTQTTLTSAD
INDGVDFADP IAVAAMLEHW REGLEAIGYL DPAHPKKLMP RFQALFARSR LRKEEIDLLR
GIAKQMLLRK
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