| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0848 |
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| Symbol | |
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| ID | 5052910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 843263 |
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| End bp | 844408 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471007 |
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| Product | NlpB/DapX family lipoprotein |
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| Protein accession | YP_001155630 |
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| Protein GI | 145589033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.733963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAATT TGTTTTTATT CTCTCGCCGT CTTTTGGCGA TATTCGCCTT ATTCCTAGCG
GTACTCGCTT TGACTTCTTG TAAGTCAGTA ACCAACAGTG ATACCGTAGA CTATAAGAGT
GCAGGCGCTG TTCGTGGGCC CAATCTATCC TACCCACCAG ATTTGATTAC TGCACAGGCC
GATCGTCGTT ATGTTGTTCA GGATGGCACT GCGACCATGT CTGAGTACAA CGCAGCGCTT
AAAAAGAATG TTCAGATGAG AAGTAATGTA ATGACTGGTA TCCCAGGAAT GCGCATTGCT
CGTGATGGAG ACCGTCGTTG GTTAGTCGTT GATAAACCTG CTCCAGAGCT ATATCCCCAG
GTCAAAGATT TTTGGCAAGA AAACGGTTTC TTGTTAACCG TCGATTCCCC ATCTACTGGA
ATCATGGAAA CCGACTGGGC TGAAAATCGC GCAAAGATTC AACAGGATTG GTTGCGCTCG
ACCCTAAATA GCGTGCTTGA TTCAATTGCT GATACTGGTG AGCGCGATAA ATATAAAACC
CGTTTAGAAG TTGCTAAACC CAATGAGACC GAGATTTACA TTACTCAAAA GGGCGCAATG
GAGAAGTGCG TATCTGATAC CACTGGCAAT TGTTTATACA CAATCTGGAC GCCACGTCCG
AGTGACCCCG AGCTTGAGGC AGTATTTCTA CAGCGTCTAA TGGAGCGCTT GGGGATGACC
CAAGAGCAAG CTAAGGCAAT GGTCGCAGCC CCAGTAGGTC CTAAAACACC AAAAGCCAAG
TTTGTTCAGC AGGCTAATAA TCAAGGCTAT ATTGAATTGA GCACAAGTTT TGACCGCTCA
TGGCGCGATG TAGGTTTGGC CTTAGATCGC TCGAACTTTA CCGTGGAAGA TCGTAATCGT
TCTACCGGCG TGTATTACGT GCGTTATGTA AATGCAAAAG ACGTGGGTGA ATCAAAAGGA
TTCTTCTCTA ACCTGTTTAG TAGCTCAGAT AACGCTGCTT TGAAGGCGAA AAAATATCAG
GTGCTAGTGA AGAGTACTGG CGAAAACTCT GCGAATGTTT ACGTACAAGA TGCAGATGGC
AAGCCAGAAA ACACTCCGGC AGGAATTCAG TTGCTGACTT TATTGAGTGA TCAACTGACT
AAGTAA
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| Protein sequence | MTNLFLFSRR LLAIFALFLA VLALTSCKSV TNSDTVDYKS AGAVRGPNLS YPPDLITAQA
DRRYVVQDGT ATMSEYNAAL KKNVQMRSNV MTGIPGMRIA RDGDRRWLVV DKPAPELYPQ
VKDFWQENGF LLTVDSPSTG IMETDWAENR AKIQQDWLRS TLNSVLDSIA DTGERDKYKT
RLEVAKPNET EIYITQKGAM EKCVSDTTGN CLYTIWTPRP SDPELEAVFL QRLMERLGMT
QEQAKAMVAA PVGPKTPKAK FVQQANNQGY IELSTSFDRS WRDVGLALDR SNFTVEDRNR
STGVYYVRYV NAKDVGESKG FFSNLFSSSD NAALKAKKYQ VLVKSTGENS ANVYVQDADG
KPENTPAGIQ LLTLLSDQLT K
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