Gene Pnuc_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0845 
Symbol 
ID5053914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp840541 
End bp841743 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID640471004 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001155627 
Protein GI145589030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTG AACGTGTTCT CTCTGGTATG CGGCCTACGG GCAATTTGCA TCTTGGCCAT 
TACCATGGTG TATTAAAAAA TTGGGTGCGT TTGCAGTCCG AATATCCTTG TTTCTTTTTT
GTTGCTGATT GGCATGCACT CACAACCCAT TACGAAACTC CGGATGTCAT CGAGCAATCT
GTGTGGGATA TGGTCATTGA CTGGTTGGCT ACGGGCGTAG ATCCTAATCA AGCTACTTTG
TTTATCCAAA GTAAAGTTCC TGAGCATGCA GAATTATTTC TTTTGCTTTC GATGGGTACG
CCATTGGGTT GGTTGGAGCG AGTTCCTACC TATAAAGATC AGATTGAAAA ATTAAAAGAA
AAAGATTTAC AAACCTATGG CTTCTTGGGC TATCCCTTAT TGCAAGCGGC GGATATTTTG
ATTTACCGCG CTCAATTTGT CCCGGTTGGG GAGGATCAGG TTCCCCACGT AGAAATGACG
CGTGAAGTAG CGCGCCGATT TAATTATCTC TATGGTCGCG AGCCCGGCTT TGAAGAAAAG
GCCTTGGAAG CGGTTAAAAA ATTGGGTAGC AAACGGGCTA AGATGTATTC AGAGTTGCGG
GTTGCCTTTC AGGAGCGTGG TGATGATGAG GCTCTGGAGC AGGCCAAGGC ATTACTACAG
GAGGCGCAAA GCCTGTCGAT GGCTGATCGC GAGCGATTGT TTGGCTTCTT AGAGGGCGCC
CGAAAAATCA TTCTTCCTGA GCCTCAAGCC TTATTAACCA CTGCATCACG AATGCCTGGT
ATTGATGGCC AAAAAATGTC TAAATCTTAT GGAAATACGA TTGGTATTCG AGAGCAGCCA
GAAGATGTGA TTAAAAAGAT TCGCACCATG CCTACAGACC CTGCCAGGGT TCGTAGAACA
GATCCAGGAG ATCCTGCGCG ATGCCCGGTA TGGCAACTGC ATGCAGTCTA TTCCAATGAA
GAAACCAAGC AATGGGTGGA TAAGAGTTGT AAATCCGCTG CTATTGGATG TCTTGAATGC
AAGCAACCAG TGATTGATGC CATTTTGGCA GAACAACAAC CGATGTTTGA GCGTGCGCAA
AAGTATTTAG ATGACCCTAG TTTGCTGCGA TCGATCATTG CAGATGGATG CGATAAGGCG
CGTAAAGTAG CTCAAGAAAC AATGCGTGAG GTCCGTGAAT CGATGGGCCT TGCCTATGAT
TAA
 
Protein sequence
MFAERVLSGM RPTGNLHLGH YHGVLKNWVR LQSEYPCFFF VADWHALTTH YETPDVIEQS 
VWDMVIDWLA TGVDPNQATL FIQSKVPEHA ELFLLLSMGT PLGWLERVPT YKDQIEKLKE
KDLQTYGFLG YPLLQAADIL IYRAQFVPVG EDQVPHVEMT REVARRFNYL YGREPGFEEK
ALEAVKKLGS KRAKMYSELR VAFQERGDDE ALEQAKALLQ EAQSLSMADR ERLFGFLEGA
RKIILPEPQA LLTTASRMPG IDGQKMSKSY GNTIGIREQP EDVIKKIRTM PTDPARVRRT
DPGDPARCPV WQLHAVYSNE ETKQWVDKSC KSAAIGCLEC KQPVIDAILA EQQPMFERAQ
KYLDDPSLLR SIIADGCDKA RKVAQETMRE VRESMGLAYD