Gene Pnuc_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0843 
Symbol 
ID5053261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp838549 
End bp839652 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID640471002 
ProductAFG1 family ATPase 
Protein accessionYP_001155625 
Protein GI145589028 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACCA TTGAGTTTTA CCAACAAGAG TTAAAAGCGC GCGGGTATCA AAGTGATCCC 
GCGCAGCTTC GTGCTGTAGA GCGTTTACAG CAGTGCGAAG ACGAATGGAT CGCTTACAAA 
GAAATCCGCA GCAATACCCT AAAGAAAAAG ATTTTTAAAC CAACGCTTCC CCGAGGGCTA 
TATCTGTGGG GTGGTGTGGG ACGTGGTAAA TCTTTCTTAA TGGACTGCTT TTATGCTGCT 
TCACCATTAG AAAAGAAAAT CCGTATTCAT TTCCATGAGT TCATGCGGGA AGTGCATCGT 
GAATTGCATG AGCTCTCAGG ATTGGCGGAT CCACTAGATG AGCTGGCAAA GCGGATATCC 
AATCGCTATC GCCTCATTTG TTTTGATGAA TTTCATATTA ACGATATTGC CGATGCAATG 
ATTTTGTACC GTCTACTCAG TGCATTATTT GCTGATCGTG TGCAGTTTGT TATGACTTCC 
AATTACCGTC CTGACCAGCT CTATCCGAAT GGCTTACATC GCGATAGGTT GTTACCAGCC 
ATCAAGCTGC TTGAAGAAAA GCTTGATGTT TTGAATGTAG ATGCGGGCAA TGATTACCGC 
CGCGTGCAGA TGGCTCAAGT AGAGGCTTAT CTCACGCCTG TAAATGCGGA AACTCAAGCA 
ACGCTTGGTG TGATGTTTCA AACCTTGATT GGAAATCAAA ATGAGGCGCG CAATCCAGTA 
TTAAATATTG AGTCTCGTGA GTTGCGACCG CTCCACATGG CTGATGGTGT AGTTTGGTTT 
GACTTCAAAA CACTGTGTTG TGGTCCACGC TCTCAAAATG ACTACCTAGA GATAGCCAAT 
CAATTTCATA CGGTGATTTT GTCAGGCGTG CCTTATATGC CCCCAAGAAT GACCAATGAA 
GCGCGTCGCT TTATTTGGCT CATCGACGTC TTATATGACC ATAAAATCAA GCTCATCATC 
TCTGCTGAGG TTCCAGCCCC TGATTTGTAT ACCGAAGGTC AAATTACAGC GGAATTTTCC 
CGAACCGTGT CCCGCTTGAT TGAAATGCAG TCTCGGGACT ACCTTGATGC GCCTCGCCGG 
GTAATTGACA CCAGCTTGAC CTAA
 
Protein sequence
MKTIEFYQQE LKARGYQSDP AQLRAVERLQ QCEDEWIAYK EIRSNTLKKK IFKPTLPRGL 
YLWGGVGRGK SFLMDCFYAA SPLEKKIRIH FHEFMREVHR ELHELSGLAD PLDELAKRIS 
NRYRLICFDE FHINDIADAM ILYRLLSALF ADRVQFVMTS NYRPDQLYPN GLHRDRLLPA 
IKLLEEKLDV LNVDAGNDYR RVQMAQVEAY LTPVNAETQA TLGVMFQTLI GNQNEARNPV 
LNIESRELRP LHMADGVVWF DFKTLCCGPR SQNDYLEIAN QFHTVILSGV PYMPPRMTNE 
ARRFIWLIDV LYDHKIKLII SAEVPAPDLY TEGQITAEFS RTVSRLIEMQ SRDYLDAPRR 
VIDTSLT