| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0842 |
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| Symbol | |
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| ID | 5052456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 837112 |
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| End bp | 838548 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471001 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001155624 |
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| Protein GI | 145589027 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG CTTTTGATGT AGTTGTAATT GGTGGTGGCC CCGGTGGCTA CATCGCCGCC
ATTCGTGCAG CGCAACTCGG TTTCAAAGTT GCCTGTGCTG AATCTAGCTC TTTTGATGAT
CCTAAGGGTG AGGTACGTTT GGGCGGTACT TGTTTAAACG TAGGCTGTAT ACCTTCTAAG
GCATTGTTGG CATCTTCTGA AGAATTCGAG AAGATTAGTC ATCATGCTAC CGATCATGGA
ATCAAAGTAG GTGCTGTAAG TATCGACTCC AAAAAGATGA TTGCCCGTAA GGATGACATC
GTCACCAAAA TGACGGGTGG GATTCAATAT TTGTTCCGTA AGAACAAGAT CACTTTGTTA
AAAGGTCACG CCTCATTTGA AGGTAAGGGC GCTGATGGTT ATCAAATCAA GATTGATGGC
AAAGATACAG AAACCGTTAC GGCAAAGAAT GTCATTATTG CGACTGGCTC TAAAGCACGT
CACCTCCCCG GTATTACTGT TGACAATGTA TTGATCTGCG ATAACGAAGG TGCACTCAAA
TTTGATTCTG CTCCTAAGAA GTTAGGTGTA ATTGGTGCTG GCGTGATTGG TCTGGAGTTA
GGTTCTGTAT GGCGCCGTCT CGGTGCTGAA GTGACTGTGC TTGAAGCAAT GCCTTCATTT
TTAGGCGCTT GCGATATCAG CATTGCAAAA GAAGCACAAA AGCTGTTTGC TAAGCAGGGT
TTGAGTATTC ATACTGGCGT CAAAATCGGT GATGTAAAAG CGGACAAGAA GGGTGTAGTT
GTCAATTACA CCGATAGCTC TGGAAAAGCT GCCAAACTCG AGTGTGAACG CTTAATCGTA
TCTGTTGGTC GTGTTCCAAA TACAGATAAA TTGGGTTTAG ATAAGATTGG CCTCAAAGTG
GATGAGCGTG GCTTTATCCC GATTGATGAC CATACTTGTG CAACTGCTGC GCCTGGTGTT
TATGCCGTTG GTGACGTAGT GCGTGGCCCT ATGTTGGCGC ATAAAGCAGA AGATGAAGGC
GTCTTGGTTG CTGAAGTGAT TGCCGGTCAA AAACCACACA TCGATTACAA CTGCATTCCT
TGGGTTATTT ACACAGATCC TGAAATTGCA TGGGTTGGCA AAACCGAACA AGCACTCAAA
GAAGCCGGCA TTGCTTATAA AGCAGGTCAA TTCCCATTCG CGGCTAATGG CCGCGCATTG
GGCATGGGTC GTGCTGATGG TTTCATCAAG GTTTTGGCGG ATGCCAAGAC TGATGAGATT
CTCGGTGTTC ATATCATTGG GGCAAATGCT TCAGATTTAA TTGCTGAAGC AGCAGTTGCG
ATGGAATTTA AAGCGGCAGC AGAAGATATT GCTCGTATCT GTCATGCACA TCCAAGTTTG
TCAGAGGTGA TGCGTGAAGC AGCATTGGCG ACAGATTCAC GTGCATTAAA TATGTAA
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| Protein sequence | MSQAFDVVVI GGGPGGYIAA IRAAQLGFKV ACAESSSFDD PKGEVRLGGT CLNVGCIPSK
ALLASSEEFE KISHHATDHG IKVGAVSIDS KKMIARKDDI VTKMTGGIQY LFRKNKITLL
KGHASFEGKG ADGYQIKIDG KDTETVTAKN VIIATGSKAR HLPGITVDNV LICDNEGALK
FDSAPKKLGV IGAGVIGLEL GSVWRRLGAE VTVLEAMPSF LGACDISIAK EAQKLFAKQG
LSIHTGVKIG DVKADKKGVV VNYTDSSGKA AKLECERLIV SVGRVPNTDK LGLDKIGLKV
DERGFIPIDD HTCATAAPGV YAVGDVVRGP MLAHKAEDEG VLVAEVIAGQ KPHIDYNCIP
WVIYTDPEIA WVGKTEQALK EAGIAYKAGQ FPFAANGRAL GMGRADGFIK VLADAKTDEI
LGVHIIGANA SDLIAEAAVA MEFKAAAEDI ARICHAHPSL SEVMREAALA TDSRALNM
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