Gene Pnuc_0837 details

Gene Information

• Locus tag: Pnuc_0837
• ID: 5053357
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 831024
• End bp: 831464
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640470996
• Product: thioesterase superfamily protein
• Protein accession: YP_001155619
• Protein GI: 145589022
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAC CAAATTCCAA GGGCAATTTA GATGCCCCGG CTTCACCCGA TCGTTTGCCA 
ATGAGCTATT TCGGATTAAA TATTCCTTTT TTGGATCATC TGGGAGTTGT GCCAGAGTTT 
GCTGAGGAGG GGAGGTCGCG CATTAGCCTC GACTTAAAGC ACGAATACAC AAATAGCTTC 
CAGGTCGCCC ATGGTGGTCT CGTGATGACT TTGCTCGATT TTGCGATGGC AGCCGCAGCT 
AGAAGTGCTG CCAAACACCC CCTAGGAGTC ATCACCATTG ATATGACGAC CAGCTTCTTG 
CGGCCTAGCG TTGGTAGGAT TGTTGTAGAA GGGCTTGTTT TAAAGGCCGG TAAGACTATT 
AATTACTGTG AGGCAGTGGT TCTGAACCAA GATGGCGAGA TAACCGCTAA GGCTAGCGGG 
ACATTTACTC TAAGAAGATG A 

 

Protein sequence

MNTPNSKGNL DAPASPDRLP MSYFGLNIPF LDHLGVVPEF AEEGRSRISL DLKHEYTNSF 
QVAHGGLVMT LLDFAMAAAA RSAAKHPLGV ITIDMTTSFL RPSVGRIVVE GLVLKAGKTI 
NYCEAVVLNQ DGEITAKASG TFTLRR