Gene Pnuc_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0835 
Symbol 
ID5052173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp830222 
End bp830545 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content44% 
IMG OID640470993 
Productintegration host factor, alpha subunit 
Protein accessionYP_001155617 
Protein GI145589020 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TGATTTCGAG TGACACCGTT ACCAAGAATG AGCTTTCTGA AGCTCTTTTT 
GATCAAGTGG GTTTGAACAA GCGTGAAGCC AAAGACATGA TTGATGCTTT TTTTGATCGC
ATTGGTCAAT CTCTTGAGGC TGGCACAGAA GTGAAGATTT CTGGTTTCGG CAATTTCCAG
TTGCGCAATA AATCGGCTCG TCCTGGCCGA AATCCAAAGA CAGGTCAAAT GATTCCCATT
GCCGCACGAC GCGTAGTTAC TTTTCACGCT AGTCAAAAGC TTAAAGATGT AGTGGAGTCT
CATGCTCGAG AAAACAGAGT TTGA
 
Protein sequence
MTELISSDTV TKNELSEALF DQVGLNKREA KDMIDAFFDR IGQSLEAGTE VKISGFGNFQ 
LRNKSARPGR NPKTGQMIPI AARRVVTFHA SQKLKDVVES HARENRV