| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0834 |
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| Symbol | pheT |
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| ID | 5052265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 827720 |
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| End bp | 830176 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470992 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001155616 |
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| Protein GI | 145589019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTT CTGAATCTTG GCTTCGTCAG TATGTAAATC CATCACTCGA TAGCGATGCT
TTAGGTCATG CCATGACTAT GGCTGGATTA GAGGTTGAAG AACAACATTC TTTTGCACCA
GCCTTTACTA AGATTGTTAT AGCGCAGATT CTATCGGCTG AGCAACACCC TGATGCAGAC
CGTTTGCGTG TGTGCAAAGT AGATGCTGGC ACTGGCCAAG AATTGCAAAT TGTGTGCGGC
GCCCCTAATG CTCGCGCAGG AATTAAGATT CCATGCGCTA TGGTCGGCGC TGAATTACCT
CCAGCGGAAG CTGGTGGTAA GCCCTTCATG ATTAAGGTTG GCAAGCTTCG TGGCGTAGAA
AGCCAAGGCA TGTTGTGCTC AGGTCGTGAA CTCGGCTTAG GTGATGATCA TGAAGGCATT
CTTGAATTGC CTCAAGATGC TCCCGTTGGA AAAGATATCC GCGAATATCT GGATCTTGAT
GATCAAATTT TTGTTATTAA GTTAACTCCG AATAAAGCGG ACTGTTTGTC TTTGTTGGGA
ATGGCAAGAG AAGTTTCTGC TATTACTGGT GCGGATTTAT GTGCTCCCAA ATGGAGCGTT
CCAGCTAAAG CTATTGATGA AAAACTCAAA GTTACAGTTG AAAACACTGA TCTTTGTGGC
CGTTTTGCTG GACGTGTAAT TCGTGGTGTA AATCCGCAGG CTAAAACACC TGAGTGGATT
GTGAAGCGCT TATCTCGCGC TGGTCAAAGA AGTATTTCTG CATTAGTTGA CCTCTCCAAC
TATGTGATGC TGGAAATGGG TCAGCCTACT CATGTATTTG ATATTGATAA GTTAAATGGC
GACATTACTG TTCGCTGGGC GAAAGTAGGC GAAACTCTTG AGCTCCTGAA TGGTCAGACA
GTCACCTTGC AGGGTCCTGA TTCAGCTGGA AAGTTACAAG ACGCAGGCGT AGTTGCTGAT
CAGTCTGGCC CAGTAGCGCT TGCAGGCATT ATGGGTGGCA ACCATTGCGC GGTTAGCGAT
GACACCAAGA ATATCTATGT AGAGGCCGCT TATTGGCTTC CTTCTGCAAT TCAGGGGCGT
GCTCGCCGTT TTAATTTCAG TACTGATGCA GCCCATCGCT TTGAACGCGG TGTTGATCCG
CAAAATACAG TTAATTGTTT GGAGTACCTT AGCTCCTTAA TTATTGAAGT ATGCGGTGGT
CAAGCAGGAC CAATAGACGA TCAAATCTTA AATGTTCCAG AGCGTAAGCC TGTTCGTATG
CGCTTAACTC GCGCTCAAAA AGTAATCGGC ATCCCTCTGA CAAATGAAAT TGTTGCAGAT
GTCTTCAAAC GCCTTGGCTT TGAATTTAAG CAAGAGGGCG ATGCATTTAT TGTGACACCA
CCGAGCTATC GGTTTGATAT CGAAATCGAA GAAGATTTGA TCGAAGAAGT GGCTCGCATG
TATGGCTTCG AAAATATTCC AGATCAACCG CCAGTGGCAT CATTAAAAAT GAGTGCCAAG
GCAGAAGCGA AGCGGGGCAT TCATTTATTG CGCCAGCGTT TAGCTCTACA AGGTTATCAA
GAGGCAGTGA ATTTTGGCTT TACTGATCTT GAAAGCGAAC GACGCTTAAT GGGCGTCTCC
GAAAAAGACG TTATTGCTGT TCTAAACCCG ATTGCCAATC AATATGGCGT GATGCGAAGC
ACCTTATGGG GTGGCTTGTT AACTAACCTG AAAGCCAATT TAAATCGTGG TGCAGGGCGT
GTTCGTCTAT TTGAAACTGG CCGTGTATTT AATCGTGATG CCAATGTTCA GGAAGAGGCT
AGCAAAGTAG CCGGTTATAA CCAACCACAA AAAATTGGTG GCTTAGCTTA CGGTTCATTT
GTTCCAGAAC AGTGGGCCAA TGCTACAAGG GCAGTAGATT TCTTTGATGT AAAGGGCGAT
CTTGAGAGGG TATTAGATCC GCTTCATTTT GTTACTGAAG CTGCGCAACA TCCAGCTTTG
CATCCCGGGC GCAGTGCGAA GATATTCTTG ACTACAGCCA AGAATCGCGT TGAAGTGGGA
TTTATCGGAG AGCTTCATCC CGGCTTGCAA CAGGCTTATG AGTTACCGCA GGCACCTGTT
TTATTTGAAT TAGAGTTAGA TCCTATTCGT GAGCTTGGCT TACCGGTGCC TGAAGAGCTG
AGTAAATTTC CTGCAGTGCA GCGTGATTTA GCAGTGGTAG TGAAGCAAAA TGTTTCTGCT
CAATCCTTGT TAGATGCCAT GAGTGCTACC AAGCAACAAT TTGTTCGGGG CATTGAGCTC
TTTGATGAAT TCAAGCCTAA GGCTGGATCT AGTAGCATGG CTGATGATGA GAAGAGTCTG
GCATTCCGAG TGACTCTTTT AAACCCAGTG GAAACATTAC AGGATCCCCA AATAGATGCA
GTAATGGCCT CTTTGTTGGG CGCTGTTGAG AAAAAGTGCG CAGCCCGTTT GCGCTAG
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| Protein sequence | MQFSESWLRQ YVNPSLDSDA LGHAMTMAGL EVEEQHSFAP AFTKIVIAQI LSAEQHPDAD
RLRVCKVDAG TGQELQIVCG APNARAGIKI PCAMVGAELP PAEAGGKPFM IKVGKLRGVE
SQGMLCSGRE LGLGDDHEGI LELPQDAPVG KDIREYLDLD DQIFVIKLTP NKADCLSLLG
MAREVSAITG ADLCAPKWSV PAKAIDEKLK VTVENTDLCG RFAGRVIRGV NPQAKTPEWI
VKRLSRAGQR SISALVDLSN YVMLEMGQPT HVFDIDKLNG DITVRWAKVG ETLELLNGQT
VTLQGPDSAG KLQDAGVVAD QSGPVALAGI MGGNHCAVSD DTKNIYVEAA YWLPSAIQGR
ARRFNFSTDA AHRFERGVDP QNTVNCLEYL SSLIIEVCGG QAGPIDDQIL NVPERKPVRM
RLTRAQKVIG IPLTNEIVAD VFKRLGFEFK QEGDAFIVTP PSYRFDIEIE EDLIEEVARM
YGFENIPDQP PVASLKMSAK AEAKRGIHLL RQRLALQGYQ EAVNFGFTDL ESERRLMGVS
EKDVIAVLNP IANQYGVMRS TLWGGLLTNL KANLNRGAGR VRLFETGRVF NRDANVQEEA
SKVAGYNQPQ KIGGLAYGSF VPEQWANATR AVDFFDVKGD LERVLDPLHF VTEAAQHPAL
HPGRSAKIFL TTAKNRVEVG FIGELHPGLQ QAYELPQAPV LFELELDPIR ELGLPVPEEL
SKFPAVQRDL AVVVKQNVSA QSLLDAMSAT KQQFVRGIEL FDEFKPKAGS SSMADDEKSL
AFRVTLLNPV ETLQDPQIDA VMASLLGAVE KKCAARLR
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