Gene Pnuc_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0833 
Symbol 
ID5052234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp826650 
End bp827696 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content47% 
IMG OID640470991 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_001155615 
Protein GI145589018 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.221956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCTC TCGACCAAAT TGTCGAGGAT GCTAAACGTG ATTTCTTGGG AGCTGCCGAT 
TCGGCGGCTC TTGAGGACGC GAAAGCCAAG TATCTCGGTA AATCAGGTGT TCTCACTGAG 
CGTTTAAAAG CGCTTGGTGG AATGTCGCCT GAAGAGCGCA AGAGTGCTGG CGCCCAAATT 
AATCAAATTA AAACTCAAGT TGAAGCTGCA TTACAAGAGC GTCGCCAAGC ATTGGCCGAT 
GCCGTACTGC AACAGCGTCT CGCTGCTGAA GCGATTGATG TTTCGCTACC AGGTCGCGGC 
CAAGCGGTAG GCAGCTTGCA TCCAGTGATG CGTACTTGGG AGCGTGTTGA GGAAATCTTC 
CGCTCTATTG GTTTTGATGT GGCTGATGGC CCTGAAATTG AAACCGATTG GTTTAATTTC 
ACTGCCTTGA ACAGTCCTGA AAATCATCCT GCACGCTCAA TGCAGGATAC CTTTTATATC 
GATGGCAAAG ATTCTAACCA GAAGCCTTTG TTATTACGCA CGCATACAAG TCCTATTCAG 
GTTCGTTATG CTAGTGAGCA TGTGAAGAAC TATGCTGACG CAGACGTGAT GCCGCCAATC 
AAGGTGATTG CACCCGGGAG AACTTATCGC GTTGATAGTG ATGCAACCCA TTCACCTATG 
TTCCATCAGG TAGAAGGCTT GTGGATTGCG GAATCTGTTT CATTTGCCGA TCTTAAGGGC 
GTCTATACAG ACTTCTTAAG AACTTTCTTT GAAACCAATG AATTACAAGT ACGTTTTCGA 
CCATCGTATT TCCCATTTAC TGAACCCTCT GCAGAGATCG ATATGGCCTT TGGTAGCGGC 
AAGCTTGCTG GTCGTTGGTT AGAGATTTCT GGTGCAGGGC AGGTGCATCC TAATGTATTG 
CGTAATATGG GTATTGATCC AGAGCGCTAT ACCGGCTTCG CCTTTGGTTC TGGTTTAGAG 
CGCTTAACAA TGTTGCGTTA CGGCATAGAT GATTTACGTC TCTTCTTTGA AAATGATTTG 
CGTTTCTTGG CGCAATTCCC CGCATAA
 
Protein sequence
MVSLDQIVED AKRDFLGAAD SAALEDAKAK YLGKSGVLTE RLKALGGMSP EERKSAGAQI 
NQIKTQVEAA LQERRQALAD AVLQQRLAAE AIDVSLPGRG QAVGSLHPVM RTWERVEEIF 
RSIGFDVADG PEIETDWFNF TALNSPENHP ARSMQDTFYI DGKDSNQKPL LLRTHTSPIQ 
VRYASEHVKN YADADVMPPI KVIAPGRTYR VDSDATHSPM FHQVEGLWIA ESVSFADLKG 
VYTDFLRTFF ETNELQVRFR PSYFPFTEPS AEIDMAFGSG KLAGRWLEIS GAGQVHPNVL 
RNMGIDPERY TGFAFGSGLE RLTMLRYGID DLRLFFENDL RFLAQFPA