| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0832 |
|---|
| Symbol | rplT |
|---|
| ID | 5053001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 826258 |
|---|
| End bp | 826623 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640470990 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_001155614 |
|---|
| Protein GI | 145589017 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0909072 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAG TCAAACGTGG GGTTACAGCA AGAGCCCGTC ATAAGAAAAT CACCGATGCC
GCTACAGGTT ACCGTGGCCG TCGTAAGAAC GTATTCCGTA TTGCTAAGCA AGCCGTTATG
CGTGCTGGTC AATATGCATA TCGTGACCGT CGCAACAAGA AACGTGTATT CCGCGCATTG
TGGATTGCTC GTATCAATGC GGCAGTTCGT CAGCATGACA TGACCTATAG CGTATTCATG
AATGGTATGA AGAAAGCTGC GATCGAACTC GACCGCAAAG TGCTTTCTGA TATGGCCATT
GCTGACAAAG CGGCTTTTGC TGCTTTGGTT ACTCGGATCA AATCCGTAGT AAACGCTGCA
GCTTAA
|
|---|
| Protein sequence | MPRVKRGVTA RARHKKITDA ATGYRGRRKN VFRIAKQAVM RAGQYAYRDR RNKKRVFRAL
WIARINAAVR QHDMTYSVFM NGMKKAAIEL DRKVLSDMAI ADKAAFAALV TRIKSVVNAA
A
|
|---|
| |