Gene Pnuc_0829 details

Gene Information

• Locus tag: Pnuc_0829
• Symbol: thrS
• ID: 5053213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 823405
• End bp: 825327
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640470987
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001155611
• Protein GI: 145589014
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.127421
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGTAG TTACTCTGCC AGATGGATCT AAACGTGAAT ATGAGGCACC AGTTCGCGTA 
GCGGATGTCG CCCAAAGCAT TGGTAGCGGC TTAGCAAAAG CAGCCTTAGG TGGCATCGTT 
GACGGCCAGA TGGTCGATAC CAGTTTTGTT ATCGACAAAG ATAGCCATCT AGCCATCATT 
ACTGACAAAA GCCCAGAAGC CTTAGAGATT GTTCGACACT CCACGGCGCA TTTGTTGGCA 
TATGCCGTTA AGGAATTATT TCCAGAGGCG CAGGTCACGA TTGGCCCTGT TATCGAAAAC 
GGTTTTTACT ATGATTTTTC TTATCATCGC CCATTTACAC CAGATGATTT AGTTGCTTTA 
GAAAAGAAAA TGACTGAGCT CGCTAAAAAA GATGAGCCAG TAGTTCGCAC TGTCATGCCG 
CGTGATGAGG CTGTTGAGTT TTTCAAGCAG CAAGGCGAGA ACTACAAAGC AGAGCTTATT 
GCCAGCATTC CTCAGGGCGA AGATGTTTCT TTATATGCTG AAGGTAAGTT TACCGATTTA 
TGTCGTGGAC CTCATGTTCC ATCCACTGGT AAGTTGAAGG TATTTAAGCT TATGAAGCTT 
GCTGGCGCTT ACTGGCGTGG TGATAGCAAG AATGAAATGT TGCAGCGTAT TTATGGCACT 
GCATGGCTGC GTAAAGAAGA TCAAGATGCT TACTTGCATA TGCTTGAAGA GTCCGAGAAG 
CGTGATCACC GTCGCTTAGG TAAGCAGCTC GATTTATTCC ACTTCCAAGA AGAAGCGCCA 
GGATTGATTT TCTGGCATCC AAAAGGTTGG TCGATCTGGC AAGAAGTGGA GCAATACATG 
CGCCGCGTTT ACCAGAACGA AGGCTATCAA GAAGTGAAGG CGCCACAAAT TTTAGATCGT 
GGGCTTTGGG AAAAATCTGG TCACTGGGAT AACTATAAAG AAAATATGTT TACCACTGAG 
TCAGAAAATC GTGCTTACGC ATTAAAGCCG ATGAACTGTC CAGGCCATGT ACAGATTTAT 
AACTCTGGTT TGCATAGCTA TCGCGAATTG CCTTTACGCT TTGGTGAATT TGGTCAATGT 
CACCGCAATG AACCATCAGG CGCATTGCAT GGTTTGATGC GCGTACGTGG CTTTACGCAA 
GATGATGGTC ATATTTTCTG TACAGAAGAT CAGATTCAGT CCGAAGTTGC CGCGTTTGAT 
AAAGCAGTGC GTGCTGTTTA CCAAGATTTT GGTTTTACTG AGGTTGCTGT AAAGCTCGCT 
TTACGTCCTG CTAAACGTGT AGGGGATGAT GCTATTTGGG ATAAAGCAGA GGATGCCTTG 
CGCGGTGCCC TCAAAGCTTC TGGTCAAGAA TGGGAAGAAT TGCCAGGAGA GGGTGCTTTT 
TATGGCCCTA AGATCGAATA CCACCTCAAG GACTCTATTG GGCGGACTTG GCAATGCGGC 
ACGATTCAGG TCGATTTCTC AATGCCTGCC CGTTTAGGGG CTGAATATGT AGCTGAGGAC 
AATAGCCGTA AGACTCCGGT GATGCTCCAT AGGGCAATTG TGGGTTCTTT AGAGCGATTT 
ATCGGTATTT TGATTGAAAA TCACGCTGGA AATATGCCAG TTTGGCTTGC TCCTACCCAG 
GCTGTAGTCC TTAATATCTC AGGAAATTCT GCTGCATATG CACAAAAAGT GCAGCAATCG 
CTGAAAAAAC AAGGGTTTAG AGTGGAGTCT GATTTGCGGA ATGAGAAAAT TACGTATAAA 
ATACGCGAGC ACGCATTACA GAAGATCCCA TTTTTGCTAG TTGTTGGTGA TAAAGAATCA 
GAAAGTAATA CGGTGGCCGT TCGTGCCCGT GGCGGAGTGG ATTTAGGTGT AATGCCTCTT 
GATGCCTTCG TTGCCCGACT CCAGCAGGAT ATATCCCAAA AAGTCGGACC CGAGCCTAGC 
TAG 

 

Protein sequence

MPVVTLPDGS KREYEAPVRV ADVAQSIGSG LAKAALGGIV DGQMVDTSFV IDKDSHLAII 
TDKSPEALEI VRHSTAHLLA YAVKELFPEA QVTIGPVIEN GFYYDFSYHR PFTPDDLVAL 
EKKMTELAKK DEPVVRTVMP RDEAVEFFKQ QGENYKAELI ASIPQGEDVS LYAEGKFTDL 
CRGPHVPSTG KLKVFKLMKL AGAYWRGDSK NEMLQRIYGT AWLRKEDQDA YLHMLEESEK 
RDHRRLGKQL DLFHFQEEAP GLIFWHPKGW SIWQEVEQYM RRVYQNEGYQ EVKAPQILDR 
GLWEKSGHWD NYKENMFTTE SENRAYALKP MNCPGHVQIY NSGLHSYREL PLRFGEFGQC 
HRNEPSGALH GLMRVRGFTQ DDGHIFCTED QIQSEVAAFD KAVRAVYQDF GFTEVAVKLA 
LRPAKRVGDD AIWDKAEDAL RGALKASGQE WEELPGEGAF YGPKIEYHLK DSIGRTWQCG 
TIQVDFSMPA RLGAEYVAED NSRKTPVMLH RAIVGSLERF IGILIENHAG NMPVWLAPTQ 
AVVLNISGNS AAYAQKVQQS LKKQGFRVES DLRNEKITYK IREHALQKIP FLLVVGDKES 
ESNTVAVRAR GGVDLGVMPL DAFVARLQQD ISQKVGPEPS