| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0828 |
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| Symbol | |
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| ID | 5052535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 821181 |
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| End bp | 823211 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470985 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001155610 |
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| Protein GI | 145589013 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATA CACCAAGTCA ATCAGACAAA ACCGCGATAT TTAAAGATGC ATGGTTTGGC
GAGCCAGCAG AGAGTCATGC GGCTGCCGTA ACAAAGATAC TGCAATCCTT AAATCTGGAT
GAAGCCACGC TTATTGCAGC CAGCAATATC GCTAGGACTC ATGGCAAAGA AGCTCTGACT
AAATTGATTG GTGATGAGCC AGCTAAGCTC TTAATAGGGT ATAGAGGGCT TCGTCAAGCC
CAAGCAAAAT TGGTTCGTGA TGATGGTGGC TTGAGTGTTT CTGGACAAGA AGAAATGCTC
CGCAAGATGC TCCTGGCCTT TGGCGATGAT CTACGAGTGG TATTAATTTA CCTAGCCTCC
CGTTTGGAAA CTCTTCGCTG GGTGACACAA GAAAAAATGG CAATGTCAGT CACATGGGCA
CAAGAGATAT TAAATATCGA TGCCTCATTG GCTAATCGTC TCGGTATATG GCAGATGAAA
TGGGAGATGG AGGATTTGGC TTTTCGAGCC CTATCTCCAG AAACTTATCG CGAGATTGCC
AATATGCTTG ATGCCAAACG AATCGAGCGA CAAGCATTCA TCGAGCGAAT TGTTGTACAG
CTTCAGGAAG AAATTAAAAC TGCGCGTATC GATGGTGAGG TGCTAGGTCG ACCAAAGCAT
ATTTATAGTA TTTGGAAAAA GATGCAAGGC AAGTCACTCG ACTTTGCCAA TCTATACGAT
GTTAGGGCGT TTCGGGTTCT GGTAGAGGAC GTAAAAACTT GCTATGCCGT TTTAGGCATC
GTCCATAACA TTTGGCAGCC AGTACCACGT GAGTTTGACG ACTATATTGC TCGACCTAAG
CCCAATGGTT ATCAATCCCT TCATACCGTA GTCATGAATG AGGATGGAGC AGCCTTTGAA
ATCCAGATTC GTACCCACGA AATGCATCAA CAAGCTGAGT ATGGATTAGC GGCGCATTGG
CGCTACAAAG AGGGCGCTTA CACTGGTATG GCAACACCAG CCAATCCTGC CAAAACAAAT
AAACCCAACG TCAGTCATCA GCAAGGCACT CATAGCGCAG AAGTGGCTTA TGAACGTCAG
ATTGCCTGGG CGAGACAGCT GATCTCCTGG AAAGAAGATG CTTGGGAGCA ACTCAAGCAC
CATGAGATTG ATGACCATAT TTATGTGCTT ACCCCGCTGG GCAAAGTAAT CTCATTAGAA
AAGGGCTCTA CACCAATTGA TTTTGCTTAT GCTGTACATA CCAATCTTGG ACATCGTTGT
CGTGGCGCGC GTGTAGATGG AGCTATGGTT CCTCTTGAGA CTGCACTACA AAATGGGCAG
ACAGTAGAGA TCATTGCCGT GAAACACGGT GGCCCATCAC GCGATTGGAT TAGTCCTGAT
AAAAATTATT TGCGCTCTCA ACGAGCACGT CAAAGAGTGC GCGCTTGGTT TAATGCGCTT
GATGATGAAG AGGGCGGCTT AGTAGCAAAG ACTTCCGACA AGACGGATAT AAGTGCCGAG
CAAAAGCCTA CACCATCTGC ACCCGAAATC GTATTACGCA ACAGCAGTCG CAAGATTGGA
CAAGGTGGCG ATGTTTTGGT GGTTGGGGTT GATTCTCTAT TGACGCAATT AGCGCGATGC
TGTCGGCCAG TGCCTCCAGA TGCTATTGGT GGGTTTGTCA CTCAGGGCAG AGGCGTATCC
ATTCATCGAC GCTCTTGCAA GACCTTTAGG GGGCTCTTGG AAAGAGCTCC TGAGCGAGTG
ATTCAAACAG CTTGGACTGC ATCAGCTGCT GACCCCGTAG TAAATTCAGA GCAAAAGCGA
GTGTTCCCTG CGGATTTGGT CGTTTCTGGG GTGGATAGAC CTGAATTAAT GAGGGAGTTG
TTTGAAATTC TGACCAGGCA AGGTGTTCAT GTCATTGATC TTCGAAAATC AGCTAAAAAA
GGCTTGGCCC AGATCCTGTT GACTGTGGAA ATTAAGGATT CTGAAGTACT TCGTGTGGTT
CAAAATAGCC TGGAAGAGGT GAAAGGCGTC ACCCAAGTGC GTCGCCGGTG A
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| Protein sequence | MANTPSQSDK TAIFKDAWFG EPAESHAAAV TKILQSLNLD EATLIAASNI ARTHGKEALT
KLIGDEPAKL LIGYRGLRQA QAKLVRDDGG LSVSGQEEML RKMLLAFGDD LRVVLIYLAS
RLETLRWVTQ EKMAMSVTWA QEILNIDASL ANRLGIWQMK WEMEDLAFRA LSPETYREIA
NMLDAKRIER QAFIERIVVQ LQEEIKTARI DGEVLGRPKH IYSIWKKMQG KSLDFANLYD
VRAFRVLVED VKTCYAVLGI VHNIWQPVPR EFDDYIARPK PNGYQSLHTV VMNEDGAAFE
IQIRTHEMHQ QAEYGLAAHW RYKEGAYTGM ATPANPAKTN KPNVSHQQGT HSAEVAYERQ
IAWARQLISW KEDAWEQLKH HEIDDHIYVL TPLGKVISLE KGSTPIDFAY AVHTNLGHRC
RGARVDGAMV PLETALQNGQ TVEIIAVKHG GPSRDWISPD KNYLRSQRAR QRVRAWFNAL
DDEEGGLVAK TSDKTDISAE QKPTPSAPEI VLRNSSRKIG QGGDVLVVGV DSLLTQLARC
CRPVPPDAIG GFVTQGRGVS IHRRSCKTFR GLLERAPERV IQTAWTASAA DPVVNSEQKR
VFPADLVVSG VDRPELMREL FEILTRQGVH VIDLRKSAKK GLAQILLTVE IKDSEVLRVV
QNSLEEVKGV TQVRRR
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