| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0827 |
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| Symbol | |
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| ID | 5053469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 819291 |
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| End bp | 821171 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470984 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001155609 |
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| Protein GI | 145589012 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGGTT CCCATCATTT CCATTCGCAT TCAAAACCAA TAAAGCCTCA TAGTCAATCT
GGGGTAGATC CTTCTTTGCA TGCCCATAAA AAGGGTGATG CTCGGCATTC CCACACCAAA
CAAGTCTCTA ATCAGAATTT AATTCTTATT GCACTTGTCC TGACATTAGG ATTTTCAGGT
GTTGAAGGTG CCGCCGCTTA TTTTGCTAAT TCATTGGCGT TGATCTCTGA TGCCGGTCAT
ATGGTGACGG ATGCTGCTGC CTTAGGTCTA GCACTTCTAG CGCAAATTAT TGCTCGTCGT
CCACCATCAC CAAGGCATTC ATTTGGGTTT GGTAGAGCAG AAGCATTAGC GGCATTTGTT
AACAGTATTG CAATGCTCGC ATTGGTACTG TGGATTGTGA TTGAAGCGAT TAGTCGTTTT
GCTAATCCGC ACAAGGTCGA TGGCTTAACC GTCACCGTTG TAGCTGCGAT TGGCCTCTTG
ATGAATGTTG TAGTGGCATG GGTCCTTTCA CGCGACACGA AGAGTGTGAA TACTCGTGCA
GCTCTAGTCC ATGTCATGGG CGACTTATTA GGATCAGTGG CGGCGTTGAT AGCTGGTATT
GTTATTCAGC TCACTGGCTG GATGCCAATT GATGCGATTC TTTCCATCTT GGTTTCACTT
CTCATCCTTA AATCGACTAT CTCGATCTTG CATGAGTCTT ATCACTTCCT CATGGAGGGT
GTGCCTTTGC ACATTGATTA CTTGGCAGTC GGTCGAGATT TAAAAGCAGT TCCCGGAGTT
TTGGCGGTTC ATGATTTACA TGTCTGGGAG ATGACCCCTA GCTTTCCCGC ACTCATTGGG
CACATTGAAA TTAGCGACAT GCAAGAGTGG CCATCCATTA TGGCTAAGAT CAATGCCATG
CTGTTAGATA AACATGGAAT TGATCACGTT ACTTTGCAAC CTGAAGAGGT TGGCCAAGAC
GAACATGATC ATGAGCATGA CGATCATGGT CTTAATACAG AAGAAAAACC AACTACTTTT
CTCCATCAGG GTGATACCTT TTATGTTCAG TGCTCTTCAG GTGAGTCTGA GCATCGCATG
GCTTACCACG TATGGGGCGA CCCTACTAAT CCAAAGGTAT TGCTTTGCGT ACACGGCTTA
ACTCGTCGCG GTAGTGATTT CAAAACATTG GCACAGGCAA TGTGTAAAGA CTATTACGTA
GTGTGTCCCG ATATCGTGGG CAGGGGTGAG TCTGATCGCT TAAGCAACCC AATGCTATAT
GCGGTGCCTC AGTATGTGGC TAACATAGCC CAACTTATTA AAAAACTTGG GGTTTCTCAA
GTCGATTGGT TGGGCACTTC GATGGGTGGA TTAATTGGTA TGGTTTACGC CGCTATGCCA
AATTGTCCAA TTCAAAAGAT GCTGATCAAT GATGTTGGCC CTAGGATTGA ACCTGAAGCA
TTAAAGCGCT TAGGTTCTTA TGTTGGCCAA CCCTTCGTTT TTGGGAATCG TGCTGATGCA
TTAGAGCGCC TCAATAAGAT ATGCGCGTCA TTTGGCGAGC ATACCCCTCA AGAGTGGGAG
ATTTATAACG GACCAATGTT GATTCAAAAG GATGAGCAGT GGATCATGCA CTACGATCCC
AATATCTCCG TACCCTTTGC CTCAGTGAAT CCTATTATGG CCAAGGCGGG GGAGATGGCG
ATGTGGCATG CCTTTAAACA AATTCGCATT CCAATGTTGA TCGTTCGCGG GGGTGACTCT
GATTTGCTAT CTGCAGCTAC GGTTGCCGAA ATGTGCAAAA TAAATCCCTA TGCAAGAAGT
ATTGAAATCC CACATGTTGG CCATGCGCCT GCATTCGTTA AACCAGAACA GATTGCTTTA
GCAAAAGAAT TTTTCAGTTA A
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| Protein sequence | MSGSHHFHSH SKPIKPHSQS GVDPSLHAHK KGDARHSHTK QVSNQNLILI ALVLTLGFSG
VEGAAAYFAN SLALISDAGH MVTDAAALGL ALLAQIIARR PPSPRHSFGF GRAEALAAFV
NSIAMLALVL WIVIEAISRF ANPHKVDGLT VTVVAAIGLL MNVVVAWVLS RDTKSVNTRA
ALVHVMGDLL GSVAALIAGI VIQLTGWMPI DAILSILVSL LILKSTISIL HESYHFLMEG
VPLHIDYLAV GRDLKAVPGV LAVHDLHVWE MTPSFPALIG HIEISDMQEW PSIMAKINAM
LLDKHGIDHV TLQPEEVGQD EHDHEHDDHG LNTEEKPTTF LHQGDTFYVQ CSSGESEHRM
AYHVWGDPTN PKVLLCVHGL TRRGSDFKTL AQAMCKDYYV VCPDIVGRGE SDRLSNPMLY
AVPQYVANIA QLIKKLGVSQ VDWLGTSMGG LIGMVYAAMP NCPIQKMLIN DVGPRIEPEA
LKRLGSYVGQ PFVFGNRADA LERLNKICAS FGEHTPQEWE IYNGPMLIQK DEQWIMHYDP
NISVPFASVN PIMAKAGEMA MWHAFKQIRI PMLIVRGGDS DLLSAATVAE MCKINPYARS
IEIPHVGHAP AFVKPEQIAL AKEFFS
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