| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0826 |
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| Symbol | |
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| ID | 5053581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 818606 |
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| End bp | 819256 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470983 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001155608 |
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| Protein GI | 145589011 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTGGA CTAGAGATGA AATGGCGGCA CGTGCTGCTC AAGAATTACG GGATGGTTAC
TATGTTAATT TGGGAATCGG TATTCCTACT TTGGTAGCCA ATCATGTACC TGCAGGCATT
GAGGTATGGC TCCAATCTGA AAATGGATTG CTAGGCATTG GACCATTTCC AACAGAAGAT
CAAATTGATG CTGACTTGAT TAATGCAGGT AAGCAAACTA TCACCACCTT GCCAGGCTCA
TCTATTTTTT CTTCGGCGGA TGCTTTCGGT ATGATCCGCG GCGGCAAAAT TAATATTGCT
TTCTTGGGTG CAATGCAGGT GAGTGAGCAT GGGGACATTG CTAACTGGAT GATTCCTGGG
AAGATGGTGA AGGGCATGGG TGGTGCCATG GATCTGGTGG CTGGCGTTAA ACACGTCGTT
GTTCTGATGG AGCATGTGGC CAAAAAGAAA GATGGAACAG AAGACATCAA AATTTTGCCT
AAGTGCACCT TGCCTTTGAC AGGTGTTGGT GTCATTAGTC AGATCATTAC TGACCTATGT
GTTTTAGACG TCACTCCCAA GGGTTTGAAG TTAACAGAAT TAGCCCCAGG CGTGACCAAG
GAAGAAGTGA TTGCTAAAAC TGGCGCCCCT GTTGATACAA CGGGTTTCTA A
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| Protein sequence | MPWTRDEMAA RAAQELRDGY YVNLGIGIPT LVANHVPAGI EVWLQSENGL LGIGPFPTED
QIDADLINAG KQTITTLPGS SIFSSADAFG MIRGGKINIA FLGAMQVSEH GDIANWMIPG
KMVKGMGGAM DLVAGVKHVV VLMEHVAKKK DGTEDIKILP KCTLPLTGVG VISQIITDLC
VLDVTPKGLK LTELAPGVTK EEVIAKTGAP VDTTGF
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