| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0825 |
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| Symbol | |
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| ID | 5052623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 817866 |
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| End bp | 818567 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470982 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001155607 |
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| Protein GI | 145589010 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA CCTACCCATC GGCAGCGGAT GCTTTGCGGG ATATCTTAAA AGATGGACAA
AAACTAGGTG TTGGTGGTTT TGGTCTATGT GGTATTCCTG AGGCTTTAAT TGAGGCAGTC
AAAGACCTGG GTGCGCAAAA TTTGACTGCG GTTTCTAATA ATGCTGGCGT CGATGGCTTT
GGCTTAGGTC TTTTATTGAA TTCTCGTCAA GTCAAAAAGA TGGTTGCATC TTATGTTGGT
GAAAACAAGG AATTTGAAAG ACAGTATTTG GCTGGTGAGT TGGAGTTGGA ATTCACGCCA
CAAGGCACAT TGGCAGAAAA GTTGCGCGCT GGTGGTTGCG GTATCCCGGC GTTTTACACA
AAGACCGGTG TTGGCACATT AGTTGCCGAA GGTAAAGAGG TAAAAGAATT TGATGGCGAG
AAATATATTA TGGAGCGCTC AATCGTCACG GATATTTCTC TAGTGAAGGC TTGGAAAGCA
GATCGTTCTG GTAATTTAGT TTATCGACAT ACAGCGCGCA ATTTCAACCC AGTAGTCGCA
ATGGCTGGCA AGATCACCGT AGCAGAAGTT GAAGAGATTG TAGAGAATGG CGAGTTGGAT
CCAGCAGAGA TCCACACTCC TGGCATTTAT GTGCAGCGTT TAGTGATTAA CGATAAGCCA
GAAAAGCGCA TTGAGCAGCG CACTATGTCA GCAACCGTTT AA
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| Protein sequence | MNKTYPSAAD ALRDILKDGQ KLGVGGFGLC GIPEALIEAV KDLGAQNLTA VSNNAGVDGF
GLGLLLNSRQ VKKMVASYVG ENKEFERQYL AGELELEFTP QGTLAEKLRA GGCGIPAFYT
KTGVGTLVAE GKEVKEFDGE KYIMERSIVT DISLVKAWKA DRSGNLVYRH TARNFNPVVA
MAGKITVAEV EEIVENGELD PAEIHTPGIY VQRLVINDKP EKRIEQRTMS ATV
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