| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0817 |
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| Symbol | |
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| ID | 5053114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 808377 |
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| End bp | 810386 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470974 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_001155599 |
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| Protein GI | 145589002 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG3258] Cytochrome c |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.04472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGT TATTAAGGGC TATCTATTTT ATTTTTGCGG CGTATAGCTT AAGCGTAGGT
GCTGTAGAGA ATTCTGGCGA CATCATCAAG AGGGGTGAAT ATCTTTCTCA CCTTGGTGAT
TGTGTTGCAT GCCATACCAA TAAAGATGGA AAGCCGATGG CCGGTGGGTT GGAGTTGAAG
ACCCCTTTTG GCGCACTCTA TTCGACCAAT ATTACGCCCG ATGAAAAGAC CGGCATAGGT
CGATATACCT TTGAACAATT TGATAGGGCA ATGCGCAAAG GTGTGGCAGC TGATGGGCAT
AATCTATATC CAGCAATGCC TTATCCATCC TATTCGAAGA TGACTACTGA TGATATGCAT
GCTCTTTATC AGTATTTGAT GTTTGGAGTT GCACCAGTCG AGCAAAAAAA CATTCCAAGT
CAAATGAAAT GGCCTTACAA CATGCGTTGG GGCCTGAGCT TTTGGAATAT TCTCTTTGGT
GGTAGTAAGC CATACATTCA GGATTCTGCA CAATCATCGC AATGGAATCG CGGCGCATAT
ATTGTTCAGG GTATGGGGCA TTGTGGATCC TGCCATACCC CCCGCGGTCT TTTATTTCAA
GAGAAGGCCA TGAGCCAGGA CGGCTCCAAT GGTAAATATT TCCTTTCAGG ATCGACAGTT
GATAGCTGGC ATGCAGTCAA TTTACGAAAT CTTTGGACGG CACCAGAAAT TGTTACTTTC
TTAAAAACAG GAAAGAATCA ACATGCGACT GCTTACGGAA CGATGACAGA GGTCATTGGC
TTAAGTACTC AGCATTTCAC AGATGAAGAT TTAATGGCTA TGGCTATCTA TTTAAAATCT
CTGAGTAATG AATCTGATGC GCAGATGCAG CCCATTCTTG CTGTTGAGAA GTCTCAGTTG
TATAAGACTA AAAATGGACT TTCTTATTAC CAGTTTTGCT CTACGTGCCA TTTGAGCGAT
GGTAAGGGTG TTCCAAAAGT ATTTCCGCCA TTGGCTGGGA ATAAGTCAAT TCTTTCAGAT
GATCCTACGT CTGTAATTCA TGTGGTGTTA AGTGGCTGGC GTTCAACCGA AACAAAAACA
AATCATCGAA TTGTGGGAAT GCCAGAATAT GGCTCTTTAG ATGATGCGGA GTTAGCAGGA
ATTATTTCCT TTATTCGATC ATCCTGGGGT AATAGCGCAC CTGCGGTTAC ACCAAATCAA
GTGAAGGCTG TACGCGATCA GCTTCAACTC GAGATTGCCA CAAAATCAAA ATTTGTTACC
CCTCGCTTTT CTAAGATGCT TGATAAAACC AATTCAAGTC AACTAGTCTA TGGAATGCGT
CTAATGTCAG AGACGGGCGT ATTGTTACCA GATCATGTGG GCAATAGTTT GAATTGCAGT
AGTTGCCATA CCAATGCAGG AACCGTAGCT AATGCTTCCC CGTATATTGG CGTTGCCGCT
CAATTTCCCG CTTATGCTCC ACGTGCAGGC AAGGTAATTG ATCTTGAAGA TCGAATCAAC
GGCTGCTTCA AGCGCTCAAT GAATGGAAAA GCGCTTGCAA AAGATTCGAA TGAAATGAAG
GCGATGATTG CTTATATGAA CTGGGTTAAT GGCCCATATC AGAAGGGTGA TCAGATTCCT
GGTCGTGGAG TTGGAAAGAT TGATAAAGCT TTAATGCCCA ATGTTGATAA TGGAAAAGTG
GTGTACCAAG CGCAATGTGC TGTATGTCAT GGCAATAATG GTGAAGGCGT GAAGAAGGCA
GATGGACGCT ATGCTTTTCC TATGGTTTGG GGTGATGAAT CCTTTAACTT AGGGGCTGGC
ATGGCTCGTA CATATACAGC TGCAGCATTT ATTAAGCAAA ATATGCCTAT GGGTCACAAC
ACGAAATTTC CGCTTGGTCA GGGTGGCAGC TTGACAGACC AGGAGGCAGT AGACGTTGCT
GAATATTTCT CACACATGGG TAGACCAGAC TTTACTGATA AGAGTAAAGA TTGGCCAAAT
GGCGAGAAAC CTAAGGATGC AAGGTATTAA
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| Protein sequence | MNWLLRAIYF IFAAYSLSVG AVENSGDIIK RGEYLSHLGD CVACHTNKDG KPMAGGLELK
TPFGALYSTN ITPDEKTGIG RYTFEQFDRA MRKGVAADGH NLYPAMPYPS YSKMTTDDMH
ALYQYLMFGV APVEQKNIPS QMKWPYNMRW GLSFWNILFG GSKPYIQDSA QSSQWNRGAY
IVQGMGHCGS CHTPRGLLFQ EKAMSQDGSN GKYFLSGSTV DSWHAVNLRN LWTAPEIVTF
LKTGKNQHAT AYGTMTEVIG LSTQHFTDED LMAMAIYLKS LSNESDAQMQ PILAVEKSQL
YKTKNGLSYY QFCSTCHLSD GKGVPKVFPP LAGNKSILSD DPTSVIHVVL SGWRSTETKT
NHRIVGMPEY GSLDDAELAG IISFIRSSWG NSAPAVTPNQ VKAVRDQLQL EIATKSKFVT
PRFSKMLDKT NSSQLVYGMR LMSETGVLLP DHVGNSLNCS SCHTNAGTVA NASPYIGVAA
QFPAYAPRAG KVIDLEDRIN GCFKRSMNGK ALAKDSNEMK AMIAYMNWVN GPYQKGDQIP
GRGVGKIDKA LMPNVDNGKV VYQAQCAVCH GNNGEGVKKA DGRYAFPMVW GDESFNLGAG
MARTYTAAAF IKQNMPMGHN TKFPLGQGGS LTDQEAVDVA EYFSHMGRPD FTDKSKDWPN
GEKPKDARY
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