Gene Pnuc_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0816 
Symbol 
ID5053270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp807149 
End bp808246 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content44% 
IMG OID640470973 
Productrhodanese domain-containing protein 
Protein accessionYP_001155598 
Protein GI145589001 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.400282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTA GTAATCCCCA TATTCTTAAA TTAGATCAAT TTCTTACAGA GTTAAATCAG 
TTTGATCTTG TGATTGATGT GAGATCACCT GCAGAATTTG CGTTAGACCA TATTCCTGGA 
GCGGTAAATT ATCCCGTTCT GAGCAATGAA GAGCGCATCC AAATCGGTAC CTTGTATAAA 
CAAGTCTCAC CGTTTGCCGC TAAAAAACTG GGTGCCGCAT TGGTCTCTCG CAATATTGCC 
AATCATCTGG AAAATCACTT ACTAGACTTG CCACGTGAAT GGCGCCCATT AATTTATTGC 
TGGCGCGGCG GCGAGAGAAG TGGTGCCTTT ACCCATATTC TCAATCGGAT AGGTTGGAAG 
GCCAAACAGC TCGAAGGTGG CTATCAAGGT TTTAGGCGGA CAGTGATTGA TGGTCTGGAA 
GAAGCTGCTA AGCAATATAC ATTTTTGGTT GTATGTGGAA TGACGGGTAG CGGTAAGACG 
AGAATTTTGC AAGAGGCTCA GAAGCTAGGC GCGCAAGTTT TGGACCTTGA AGCCCTGGCA 
ATTCATCGGG GTTCAGTGCT GGGTAATGAG CCCAATATTG AGCAGCCCTC ACAAAAAGCC 
TTTGAAACAG AGCTATGGAA TGCTTTCCGT ACTTTAGATC CTAGCAAGAC TGTATTGGTT 
GAGTCTGAAA GCAAGAAGGT TGGGGGTGTA CATATCCCCG ACGCATTGAT GGAAAAAATT 
CGCAATGGCG CCTGCATTGA GTTGAGGTCT AGTACTCAGA CGCGGGTATC GTGGTTGATT 
CGTGAGTACC ATCATTTTTT GAGTGATACC GATAATTTCA AAGCCAAATT AGCTTTGCTC 
ACAGCGCATT ACGGAAAAGT ACAAATTGCT AAATGGAATG AAGCAATTGA TGCAGGTCAT 
TTTCCAGAAT TAGTTGAGGA GTTGTTGGTC AAGCACTATG ACCCGTCTTA TCAATCATCT 
ATTGTGCGTA ACTTTCCTCA ATACAAAATT GAGAACTTTG TGCAGCTAGA AAATGATGGT 
GATGAGGCCT TTGCTAAAGC AGCGAAGGTA ATTGTGATGC GCATTGACTC CCCCATATGT 
AACCTGAAAT CAGTTTGA
 
Protein sequence
MQPSNPHILK LDQFLTELNQ FDLVIDVRSP AEFALDHIPG AVNYPVLSNE ERIQIGTLYK 
QVSPFAAKKL GAALVSRNIA NHLENHLLDL PREWRPLIYC WRGGERSGAF THILNRIGWK 
AKQLEGGYQG FRRTVIDGLE EAAKQYTFLV VCGMTGSGKT RILQEAQKLG AQVLDLEALA 
IHRGSVLGNE PNIEQPSQKA FETELWNAFR TLDPSKTVLV ESESKKVGGV HIPDALMEKI 
RNGACIELRS STQTRVSWLI REYHHFLSDT DNFKAKLALL TAHYGKVQIA KWNEAIDAGH 
FPELVEELLV KHYDPSYQSS IVRNFPQYKI ENFVQLENDG DEAFAKAAKV IVMRIDSPIC 
NLKSV