Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0802 |
Symbol | |
ID | 5052467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 797169 |
End bp | 798251 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470959 |
Product | cytochrome c, class I |
Protein accession | YP_001155584 |
Protein GI | 145588987 |
COG category | [C] Energy production and conversion |
COG ID | [COG4654] Cytochrome c551/c552 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.641735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGT TGGCTAAAGT TGCAAAATTC ACTCTGTTTG CAGTTACAAC ATTTTTTGCG GTTGGTTCAG TGGTTGCGCA GAATTCGAGC ACGCACTATC CAGGCATCGG CAGAGACGCT ACGCCGGCAG AAGTTGCGGC CTGGGATATT GATGTTCGAC CAGACTTTAA AGGACTTCCC AAGGGATCTG GTTCGGTAGA AAAAGGTCAG CAACTCTGGG AAGCAAAGTG CTCTGTTTGT CATGGTACGT TTGGTGAGTC TAACGAGATA TTTACGCCCA TCATTGGTGG AACAACCACG GATGATATTA AAACGGGCAG GGTAGCTTCC CTTTCGGATA GAAAGCAGCC CCAAAGGACA ACCATTATGA AAGTGGCGAC AGTTTCTTCA TTGTGGGATT ACATCTATCG TGCAATGCCT TGGAATGCTC CGCGCTCACT CACGCCGGAT GACACCTTTG CATTGGTGGC TTACTTATTA AATATGGCGG AAGTAGTGCC TGATGATTTC GTGCTTAGCA ACACTAATAT TGCTGAAGTA CAAAAACGAA TGCCAAACCG AAATGGTATG ACTTTGAAGC ATGGCTTGTG GAATTCCAAA GGCACACCAG ATGTTCACGC TACTGCTTGC ATGACCAACT GTGTGCAATT CGTTCAAATT GGTTCAGAGT TGCCCGATTA CGCACGAAAT GCTCACGGAA ACATTGCAGA GCAGAATCGC CAATATGGCC CATTCCGCGG ATCTGACTCT ACAAAACCAC CCCTGACTAA GTTACCAGGC GCTTCAGCCG AAGGTTTAGC TCATGCATCT GAAACACATG CTTCTAAAAA GGGGCCGGCT GAATTGTTTA AGAGCGAGAA CTGCACGGCT TGCCATGCAA TGAGCACTAA GCTGGTTGGT CCTTCCGTTG CCGACATTGC TGCTAAATAT CAAGGGCAAA GTGGGGCTTT GGATACGCTA ATGGCTAAGG TTAAGAATGG AGGTTCAGGA GTTTGGGGAC CAATTCCGAT GCCAGCTCAG TCTCAATTGT CTGATGAAGA TCGTAAGGCG CTCGTGACTT GGGTGCTTTC TGGAGGTAAA TAA
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Protein sequence | MFKLAKVAKF TLFAVTTFFA VGSVVAQNSS THYPGIGRDA TPAEVAAWDI DVRPDFKGLP KGSGSVEKGQ QLWEAKCSVC HGTFGESNEI FTPIIGGTTT DDIKTGRVAS LSDRKQPQRT TIMKVATVSS LWDYIYRAMP WNAPRSLTPD DTFALVAYLL NMAEVVPDDF VLSNTNIAEV QKRMPNRNGM TLKHGLWNSK GTPDVHATAC MTNCVQFVQI GSELPDYARN AHGNIAEQNR QYGPFRGSDS TKPPLTKLPG ASAEGLAHAS ETHASKKGPA ELFKSENCTA CHAMSTKLVG PSVADIAAKY QGQSGALDTL MAKVKNGGSG VWGPIPMPAQ SQLSDEDRKA LVTWVLSGGK
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