Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0778 |
Symbol | |
ID | 5052697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 778056 |
End bp | 779594 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470935 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001155560 |
Protein GI | 145588963 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000128601 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCGGCG TCGTCGGAAC AGTTTCCCAC TCACCAGTAA ATCAACTTCT CTATGACGCA TTGTTGCTTT TGCAACATCG CGGACAAGAT GCAGCCGGTA TCGCAACGAT GAACGGCAAT TCGTTCACGA TGCATAAAGC TAATGGCTTG GTACGAGATG TCTTTAGAAC TCGCAATATG CGTAGCTTAG TTGGTAATGC CGGTATCGGA CAGGTAAGGT ACCCAACTGC CGGTTCTGCC AGTAGCGAAG AAGAGGCGCA GCCCTTTTAT GTAAGCGCTC CTTATGGAAT TATCTTGGCA CATAACGGCA ACCTCACCAA CGCACCAAGC TTGCGTGTGG AGATGGCTTA TCGTGATCGT CGCCATATCA ATACCAGCTC AGATACTGAG GTACTCCTCA ATGTATTGGC TGATGAACTT CAAAAAGAAA CGAACAGCGC CGCTTTAGAT GAGACGGCAA TGTTTAATGC TGTTACGGGC GTAACAAGTA GGGTCAAAGG TTCTTATGCG GTGGTTTCTT TAATTGCTGG TTATGGTTTA TTAGCCTTCC GCGATCCTTT TGGTATCCGT CCTTTATGCA TTGGCCGCAT TGATACGCCA CAGGGCCCTG AGTGGATGGT GGCATCTGAA TCAGTAGCTT TGGAAGGCTT AGGATTTACT TTTGTCCGTG ATGTTCATCC AGGCGAAGCG ATCTATGTCG ACTTGGATGG TAATTTCTAT TCACGTCAGT GTGTTCCGAA TGCCGTTCTA ACGCCTTGTA TTTTTGAATA TGTTTACATG GCTAGACCTG ACTCCACAAT TGATGGCGTT ACGGTCTACA ACGTGCGTAT GCGTATGGGC GATTACCTAG CTGAAAAGAT CCGCAAAGAA ACCAATGTTG ATGAAATCGA TGTAGTCATG CCGATTCCAG ACTCTAGTCG TCCAGCTGCG ATGCAAGTGG CTAAGAAATT AGGCATTGAC TATCGTGAAG GCTTTTTTAA GAACCGTTAT ATCGGTAGAA CCTTCATCAT GCCGGGGCAG GCTGTGCGCA AGAAATCCGT GCGTCAAAAA CTCAATGCTA TGCGTATTGA ATTCAAAGAT AAAACGGTAT TAATTGTTGA TGACTCTATC GTGCGCGGTA CTACCTCTTT TGAGATTGTA CAAATGGCTC GTGAGTCTGG TGCTAAGAAA GTCATCTTTG CTTCTGCAGC ACCTCCTGTA CGCTTCCCTA ACGTCTATGG CATCGACATG CCTACGCGTA GTGAGTTAGT TGCTTATGGC CGCACTGATG CAGAAATTAA TAAGATGATT GGCGCTGACC AACTGATTTA TCAAAGTGTT GAGGATATGA AGCAAGCGGT TCGTGACATT AATCCGAATA TTCAGCAATT TGAAGCTTCT TGTTTTGATG GCAATTACAT CACTGGGGAT ATTAACGACT CGTATTTGGA TGCCCTCGAG GCGCAGCGCA ATTCCACTGC GGCTAAAGCG GATCGTCAGC GTGATTCCAG CGACTTTGCC CGTTCCCAGC TTCATTTGCA TTTGGCTACC GAAGACTAA
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Protein sequence | MCGVVGTVSH SPVNQLLYDA LLLLQHRGQD AAGIATMNGN SFTMHKANGL VRDVFRTRNM RSLVGNAGIG QVRYPTAGSA SSEEEAQPFY VSAPYGIILA HNGNLTNAPS LRVEMAYRDR RHINTSSDTE VLLNVLADEL QKETNSAALD ETAMFNAVTG VTSRVKGSYA VVSLIAGYGL LAFRDPFGIR PLCIGRIDTP QGPEWMVASE SVALEGLGFT FVRDVHPGEA IYVDLDGNFY SRQCVPNAVL TPCIFEYVYM ARPDSTIDGV TVYNVRMRMG DYLAEKIRKE TNVDEIDVVM PIPDSSRPAA MQVAKKLGID YREGFFKNRY IGRTFIMPGQ AVRKKSVRQK LNAMRIEFKD KTVLIVDDSI VRGTTSFEIV QMARESGAKK VIFASAAPPV RFPNVYGIDM PTRSELVAYG RTDAEINKMI GADQLIYQSV EDMKQAVRDI NPNIQQFEAS CFDGNYITGD INDSYLDALE AQRNSTAAKA DRQRDSSDFA RSQLHLHLAT ED
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