Gene Pnuc_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0778 
Symbol 
ID5052697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp778056 
End bp779594 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content46% 
IMG OID640470935 
Productamidophosphoribosyltransferase 
Protein accessionYP_001155560 
Protein GI145588963 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000128601 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCG TCGTCGGAAC AGTTTCCCAC TCACCAGTAA ATCAACTTCT CTATGACGCA 
TTGTTGCTTT TGCAACATCG CGGACAAGAT GCAGCCGGTA TCGCAACGAT GAACGGCAAT
TCGTTCACGA TGCATAAAGC TAATGGCTTG GTACGAGATG TCTTTAGAAC TCGCAATATG
CGTAGCTTAG TTGGTAATGC CGGTATCGGA CAGGTAAGGT ACCCAACTGC CGGTTCTGCC
AGTAGCGAAG AAGAGGCGCA GCCCTTTTAT GTAAGCGCTC CTTATGGAAT TATCTTGGCA
CATAACGGCA ACCTCACCAA CGCACCAAGC TTGCGTGTGG AGATGGCTTA TCGTGATCGT
CGCCATATCA ATACCAGCTC AGATACTGAG GTACTCCTCA ATGTATTGGC TGATGAACTT
CAAAAAGAAA CGAACAGCGC CGCTTTAGAT GAGACGGCAA TGTTTAATGC TGTTACGGGC
GTAACAAGTA GGGTCAAAGG TTCTTATGCG GTGGTTTCTT TAATTGCTGG TTATGGTTTA
TTAGCCTTCC GCGATCCTTT TGGTATCCGT CCTTTATGCA TTGGCCGCAT TGATACGCCA
CAGGGCCCTG AGTGGATGGT GGCATCTGAA TCAGTAGCTT TGGAAGGCTT AGGATTTACT
TTTGTCCGTG ATGTTCATCC AGGCGAAGCG ATCTATGTCG ACTTGGATGG TAATTTCTAT
TCACGTCAGT GTGTTCCGAA TGCCGTTCTA ACGCCTTGTA TTTTTGAATA TGTTTACATG
GCTAGACCTG ACTCCACAAT TGATGGCGTT ACGGTCTACA ACGTGCGTAT GCGTATGGGC
GATTACCTAG CTGAAAAGAT CCGCAAAGAA ACCAATGTTG ATGAAATCGA TGTAGTCATG
CCGATTCCAG ACTCTAGTCG TCCAGCTGCG ATGCAAGTGG CTAAGAAATT AGGCATTGAC
TATCGTGAAG GCTTTTTTAA GAACCGTTAT ATCGGTAGAA CCTTCATCAT GCCGGGGCAG
GCTGTGCGCA AGAAATCCGT GCGTCAAAAA CTCAATGCTA TGCGTATTGA ATTCAAAGAT
AAAACGGTAT TAATTGTTGA TGACTCTATC GTGCGCGGTA CTACCTCTTT TGAGATTGTA
CAAATGGCTC GTGAGTCTGG TGCTAAGAAA GTCATCTTTG CTTCTGCAGC ACCTCCTGTA
CGCTTCCCTA ACGTCTATGG CATCGACATG CCTACGCGTA GTGAGTTAGT TGCTTATGGC
CGCACTGATG CAGAAATTAA TAAGATGATT GGCGCTGACC AACTGATTTA TCAAAGTGTT
GAGGATATGA AGCAAGCGGT TCGTGACATT AATCCGAATA TTCAGCAATT TGAAGCTTCT
TGTTTTGATG GCAATTACAT CACTGGGGAT ATTAACGACT CGTATTTGGA TGCCCTCGAG
GCGCAGCGCA ATTCCACTGC GGCTAAAGCG GATCGTCAGC GTGATTCCAG CGACTTTGCC
CGTTCCCAGC TTCATTTGCA TTTGGCTACC GAAGACTAA
 
Protein sequence
MCGVVGTVSH SPVNQLLYDA LLLLQHRGQD AAGIATMNGN SFTMHKANGL VRDVFRTRNM 
RSLVGNAGIG QVRYPTAGSA SSEEEAQPFY VSAPYGIILA HNGNLTNAPS LRVEMAYRDR
RHINTSSDTE VLLNVLADEL QKETNSAALD ETAMFNAVTG VTSRVKGSYA VVSLIAGYGL
LAFRDPFGIR PLCIGRIDTP QGPEWMVASE SVALEGLGFT FVRDVHPGEA IYVDLDGNFY
SRQCVPNAVL TPCIFEYVYM ARPDSTIDGV TVYNVRMRMG DYLAEKIRKE TNVDEIDVVM
PIPDSSRPAA MQVAKKLGID YREGFFKNRY IGRTFIMPGQ AVRKKSVRQK LNAMRIEFKD
KTVLIVDDSI VRGTTSFEIV QMARESGAKK VIFASAAPPV RFPNVYGIDM PTRSELVAYG
RTDAEINKMI GADQLIYQSV EDMKQAVRDI NPNIQQFEAS CFDGNYITGD INDSYLDALE
AQRNSTAAKA DRQRDSSDFA RSQLHLHLAT ED