Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0773 |
Symbol | trpA |
ID | 5052358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 773621 |
End bp | 774418 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470930 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001155555 |
Protein GI | 145588958 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0621096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA TAACTGCACT CTTTAAAGAG CTCAAAGCAA GCGGAAAGAA GGGATTGATT CCCTTCATTA CTGCCGGTGA TCCTGATCCC AAATTAACCG TGGAATTAAT GCATGCACTC GTGCGTGGTG GCTCTAGCGT AATTGAATTG GGCGTGCCAT TCTCTGATCC GATGGCTGAT GGTCCCGTGA TACAGAGATC TTCTGAGCGT GCTTTGACAC AGGGAGTTAC TTTACATAGC TGCCTAGACA TGGTGAAAGA GTTTCGCAAA AAAGATGCAA CGACTCCAGT CGTTTTAATG GGATATGCAA ATCCTGTTGA GCAAATGGGT GCAGAGAGAT TTGCAACCGA AGCAAAAGCA GCTGGGGTAG ATGGAGTCCT GATTGTTGAC TATCCGCCTG AGGAATGCGT TGATTTTGCG GCACGCATGC GTGTTGCAGG AATTGACCCG ATTTTCTTAT TAGCGCCAAC TTCATCCCAT GAGCGCATTA AAGAGGCTGC CAAAATAGCT TCTGGTTATA TCTATTACGT TTCCATGCGT GGTGTAACAG GCGCTTCCCA TCTCAATACC CAGGATGTAG CCAGCATCAT CCCTAAAATT CGGGAAGAAA CCGATATTCC TATCGCCGTA GGCTTTGGAA TTAACGATGC AGCAAGTGCC AAGGCTGTTT CAGTCAGCGC TGACGCAGTG GTCATAGGGA GCCGGATTAT TCGCCTTTTG GAGGATGCAC CCCCTGGGCA GGCAGTACAA TCATTGGAAA CCTTCATTCG TGAGATTCGC GACGCATTGG ATAGTTAA
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Protein sequence | MSKITALFKE LKASGKKGLI PFITAGDPDP KLTVELMHAL VRGGSSVIEL GVPFSDPMAD GPVIQRSSER ALTQGVTLHS CLDMVKEFRK KDATTPVVLM GYANPVEQMG AERFATEAKA AGVDGVLIVD YPPEECVDFA ARMRVAGIDP IFLLAPTSSH ERIKEAAKIA SGYIYYVSMR GVTGASHLNT QDVASIIPKI REETDIPIAV GFGINDAASA KAVSVSADAV VIGSRIIRLL EDAPPGQAVQ SLETFIREIR DALDS
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