Gene Pnuc_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0768 
Symbol 
ID5052163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp768254 
End bp769411 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content47% 
IMG OID640470925 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001155550 
Protein GI145588953 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA CAAAAACACC TTTGGTAGGT TTAGTTGGCT GGCGTGGAAT GGTTGGAAGC 
GTTCTCATGG AGCGCATGCT GGCTGAAAAA GATTTTGATT TCATCGAGCC GGTATTTTTT 
AGTACTAGCC AGGCAGGTGG CGAAGTGCCA TTGCTTAATG GTCAAAAAGT CACCAAGAGC 
GAAAGCACCT TGCAAGATGC AAATGACATC AAAGCATTGT CACGATGCGA CATTATTTTG 
ACTTGCCAAG GCGGTGACTA CACCAACGAT ATCTTCCCTA AACTACGTGC AGCAGGGTGG 
AATGGTCATT GGATCGATGC AGCGAGTGCA TTGCGTATGA AAGATGACGC TGTTTTGGTC 
TTAGACCCGG TCAATCGTCC CGTCATTGAT AAAGCATTGG CTGCTGGCGG TAAAAATTGG 
ATTGGTAGTA ACTGCACCGT GAGCTTGATG ATGATGGCTA TGGGTGGTTT GGTTAAGGCC 
GATATGGTTG AATGGATTAG CGCTATGACT TACCAGGCTG CCTCTGGGGC TGGCGCTCAA 
AATATGCGTG AGCTCTTATT GCAAATGGGT GCCTTACGCG ATAGCGTTGC AACAGAGTTG 
GCTGATCCTT CATCATGGAT TTTGGATATC GATCGGAAGA TTACTGAGAC ATTGCGCTCC 
GCTGATTTTC CAAAGAAAAA TTTCCGTAAT ACTGCCTTGG CTGGTAGCTT GATTCCATGG 
ATTGATGTTC CAGTAGAGAA TGGCCAGACT AAAGAAGAGT GGAAGGGTGG CGCTGAGTTC 
AATAAGATCT TGGGCCGTCC TGCATTCCGC ACACCTGGTA GCATTCCAAT TGATGGCTTA 
TGTGTCCGGG TTGGCGCAAT GCGTTGTCAC TCACAAGGTT TAACTGTGAA GTTGAAAAAA 
GATATTCCCC TTAAGGAAAT CGAAGCTATT TTAGCCAATG ACAATCAATG GGTAAAAGTA 
GTTCCCAATG ATCGCGAAAC TACTGAGCGT GATTTATCGC CAGCAGCAGT GAGCGGGACG 
TTGACTGTGC CCATCGGCCG TCTTCATAAG ATGGCGATGG GTCCAGAATA CTTGGGCGCC 
TTTACCGTAG GTGATCAATT GTTGTGGGGT GCAGCCGAAC CATTGCGTCG CATGCTCAGA 
ATTTTGCTTG AGAAGTAA
 
Protein sequence
MANTKTPLVG LVGWRGMVGS VLMERMLAEK DFDFIEPVFF STSQAGGEVP LLNGQKVTKS 
ESTLQDANDI KALSRCDIIL TCQGGDYTND IFPKLRAAGW NGHWIDAASA LRMKDDAVLV 
LDPVNRPVID KALAAGGKNW IGSNCTVSLM MMAMGGLVKA DMVEWISAMT YQAASGAGAQ 
NMRELLLQMG ALRDSVATEL ADPSSWILDI DRKITETLRS ADFPKKNFRN TALAGSLIPW 
IDVPVENGQT KEEWKGGAEF NKILGRPAFR TPGSIPIDGL CVRVGAMRCH SQGLTVKLKK 
DIPLKEIEAI LANDNQWVKV VPNDRETTER DLSPAAVSGT LTVPIGRLHK MAMGPEYLGA 
FTVGDQLLWG AAEPLRRMLR ILLEK