| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0766 |
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| Symbol | leuD |
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| ID | 5053795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 766464 |
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| End bp | 767111 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470923 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001155548 |
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| Protein GI | 145588951 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TTACGGTATA CAAAGGTTTG GTTGCTCCGC TTAATCGCGA GAATGTGGAT
ACCGATGCCA TTATTCCGAA GCAGTTTTTA AAGTCCATCA AAAAGACTGG CTTTGGTCAG
AACTTGTTTG ATGAATGGCG CTATTTAGAT CATGGTGAAC CTGGCCAAGA TTGCAGCACG
CGTCCCATTA ACCCAGACTT TGTTCTTAAC CAGCCACGCT ATAAAGGCGC TGGTATTTTG
CTGGCTCGCA AAAACTTTGG TTGCGGCAGC TCTCGTGAGC ATGCTCCCTG GGCATTAGAT
CAATTTGGCT TCAGGGCCGT AATTGCCCCT AGCTTTGCCG ATATCTTCTA CAACAACTGT
TTCAAAAATG GTGTTCTGCC AATTGTGTTG ACTGAGATGC AGGTAGACCA TTTATTTAAT
GAAACTCAGG CATTTAACGG TTACCAGCTC ACCATCGATT TAGAAGGCCA AAAGGTCATT
ACGCCTGATG GCACAGCATA TAGCTTTGAT GTGGCCCCAT TCCGTAAGCA TTGCCTACTC
TACGGGCTAG ACGATATTGG TTTAACCCTG CAACATGCAG ATAAAATCAA GGCTTATGAA
GCTGAGCGCA TTTTGAAGAT GCCTTGGCTT GCGACACAAT TGCCGTAA
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| Protein sequence | MEKFTVYKGL VAPLNRENVD TDAIIPKQFL KSIKKTGFGQ NLFDEWRYLD HGEPGQDCST
RPINPDFVLN QPRYKGAGIL LARKNFGCGS SREHAPWALD QFGFRAVIAP SFADIFYNNC
FKNGVLPIVL TEMQVDHLFN ETQAFNGYQL TIDLEGQKVI TPDGTAYSFD VAPFRKHCLL
YGLDDIGLTL QHADKIKAYE AERILKMPWL ATQLP
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