| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0735 |
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| Symbol | |
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| ID | 5053320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 737188 |
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| End bp | 738792 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470892 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001155517 |
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| Protein GI | 145588920 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.288359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA TAATCGAAAT TAAAGTTCCC GATATTGGTG ATTACAAAGA CGTTCCAGTC
ATTGAAGTTC TGGTTAAGCC TGGTGATCAA GTAGAGAAAG AGCAATCTAT TGTTGTTCTT
GAGTCCGATA AAGCCACGAT GGATGTTCCT TCTTCTCACT CTGGAATTGT GAAAGAAGTG
AAGGTCAAGG TTGGCGATAA CCTTTCTGAG GGATCGGTTG TGATCATGTT GGAGGAGGGC
GCTGCTGCAG CCGCACCAAC TCCAACAGCA AGTGCGCCAG CACCCGTTGC GGTCGAGGCT
AGTTCGGGCG GAGCGCCAAT CGAAATTAAA GTTCCCGATA TCGGTGATTA CAAAGACGTT
CCAGTCATTG AAGTTCTGGT TAAGGCTGGT GACAAAGTTG AAAAAGAACA ATCCATTGTT
GTTCTAGAAT CTGATAAAGC AACGATGGAT GTTCCTTCTT CTCACGCTGG AATTGTGAAA
GAAGTGAAGG TCAAAGTTGG CGACAACCTT TCTGAGGGGT CGGTTGTAGT GATCTTAGAG
GGAGGCTCTG CAGTTGCTAC TCCACCAGCA GTGTCTTCTG CAGCTCCTGC TCCTGCTGCG
ACTAAAGCGG TAGCAGTAGA GCCGCCAATT GCTCGGGCTC CGGCACCTCC TCCGGTGAGC
AATACGCCGG CTCCAATAGA TGCCGCATTG AGTCACGCCA GTCCTTCTGT TCGTAAGTTC
GCTCGCGAAC TCGGTGTCAC TATCACCCAG GTAAAAGGAT CTGGTCCTAA AGGCCGCATT
ACTCAGGAAG ACGTCCAGGC ATTTGTTAAA GCGGCTATGA GTGGTGGCGC TGGTAATCCT
GCTGCTGCAC CCAGTGGTGA TAGTTTGGGT GGACTCAATA TTATTCCTTG GCCTAAAGTT
GATTTCGCTA AGTTTGGTGA GATCGAGCGT CAACCATTAA ATCGCATTAA GAAACTCACT
GCTGCCAATC TCGGCCGTAA CTGGATCATG ATTCCTGCTG TGACATATCA CGAAGATGCG
GATATCACTG ATTTAGAAGC ATTCCGAGTA TTGACTAATA AAGAGAATGA AAAGAAGGGT
GTCAAAATTA CGATGCTCGC CTTCTTAATG AAGGCTGCAG TAGCTGCCTT GAAAAAATAC
CCAGAATTTA ATAGTTCCTT GGATGGTGAT GATTTGATAT TGAAGAAGTA TTTCAATATT
GGTTTTGCTG CTGATACCCC TACCGGTTTA GTGGTGCCTG TCATTAAAGA CGTAGATAAA
AAAGGTATCT TTGATTTAGC TAAAGAAACT TCTGACTTGG CCGCCTTGGC CCGTGATGGC
AAGCTGAAAC CCGAGCAAAT GCAAGGTGCT AGCTTCACTA TTTCCTCTTT AGGAGGTATC
GGCGGTACCT ATTTCTCCCC GATCGTGAAT GCGCCAGAAG TGGCTATTTT AGGTGTGAGT
AAGGCTGCTA TGAAGCCAGT ATGGGACGGT AAGCAATTTG TCCCACGCCT GATTTGCCCA
TTGTCATTAT CTGCAGATCA TCGTGTGATT GATGGCGCCT TAGCGACACG TTTTAACGTG
TACATTGCTC AACTTTTAGC CGACTTCCGT CGCGCTAGTC TGTAA
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| Protein sequence | MSQIIEIKVP DIGDYKDVPV IEVLVKPGDQ VEKEQSIVVL ESDKATMDVP SSHSGIVKEV
KVKVGDNLSE GSVVIMLEEG AAAAAPTPTA SAPAPVAVEA SSGGAPIEIK VPDIGDYKDV
PVIEVLVKAG DKVEKEQSIV VLESDKATMD VPSSHAGIVK EVKVKVGDNL SEGSVVVILE
GGSAVATPPA VSSAAPAPAA TKAVAVEPPI ARAPAPPPVS NTPAPIDAAL SHASPSVRKF
ARELGVTITQ VKGSGPKGRI TQEDVQAFVK AAMSGGAGNP AAAPSGDSLG GLNIIPWPKV
DFAKFGEIER QPLNRIKKLT AANLGRNWIM IPAVTYHEDA DITDLEAFRV LTNKENEKKG
VKITMLAFLM KAAVAALKKY PEFNSSLDGD DLILKKYFNI GFAADTPTGL VVPVIKDVDK
KGIFDLAKET SDLAALARDG KLKPEQMQGA SFTISSLGGI GGTYFSPIVN APEVAILGVS
KAAMKPVWDG KQFVPRLICP LSLSADHRVI DGALATRFNV YIAQLLADFR RASL
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