| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0733 |
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| Symbol | |
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| ID | 5052241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 731746 |
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| End bp | 734283 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470890 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001155515 |
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| Protein GI | 145588918 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0810932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTA ATCATATGAA ATTCAGCGCT TTTTCCAGCC TACTGCTCAG CCCATTTAAA
TGGCTCCGAA AAATACGGGG ATTTCGGCTC GTTTACACAC CGCTGCTCGC CATCGTTCTT
TTTACTGCGG TAATGGGCAT CATTTTGGGA ACGCTGCACC TCCAAGAGAA GAATCAACAA
GAAGCCGCTC TATTTAGAGA GCTCTCATTT GCCAAGCAGC GCATTCAAGT GCGCTTTGCA
AATAATCTTG AAACGCTCAA TACAATCAAT CGCGAAATTG CAGTGAGTGC TGATGACACA
AAGCTGAAAC AGCTTGCGCA TGAACAATCT GATGATCTGG TTATTAATAA TCATGAGATT
GTCAAAGTTC TCTGGTTGAA TGAAAAATAT CAACGCCAAT GGAGTGCTCC ACCAAGTACG
TCCAAACCCG ATTGGATTGG TAAAACTCAG AATGATCAAG CAATTAATAC TGCTCTAAGT
AATGCAATTG AATTGAGTAG GTTAACTGGT CGTGCAGCAT TCAGCCCATT TCTGACTCTG
ACTTTGCCAA GCACTGATCC GCCCGTCAAC GATAGGATTG TTTTTTGGCA AGTGGTGCCC
AATATTGTTG GTGGAGAGGC GATTGGCTTT TTAGCCGCTC TATACACCAC ACAAGGAATA
CTCGACATCA TTCCAGGTGA CTTAAAAGCC CACTACCGCT TTACCCTTCT TGCTGATAAC
GAACGAGTCT TATCCATTTC ATCGGACCGC GATATCCCCA AAAGGGCTTT TAGCAATCAG
ACCAGCTTAG ATATTGGGGT TCTTAGTCCT AATATGACTT TGCGGATTGA TACTTACCCG
CCCCCAACTA ATCTCACATT CAGAATGCTG ATCGGGGTTG TTTTAGGATT ATCTGCCTTC
GTGATTTGGA GTTTGTGGTC AGTTCTAAAA CAAATGCAAG TTCGCCAAGA AGCAGAGGCC
AATTTACGGA CAGAAACAAA CTTTCGTAAT GCAATGGAAA ACTCCACACC AATTGGTATC
CGTGCACATG ATATGCAAAA ACGCATTACG TATGTCAACC GCGCATTCTG TGAAATGACG
GGTTGGACAC CAAATGAGCT CATTGGCCTT CACCCTCCCT TCCCCTTTTG GCCAGATAGC
AGAAGAGATG AGTTAGTCGA GAAAATGAAT CGCGCCCTTA ATTCAGATAT TGATGCGGGA
ATGAAAAAGG GGATCGAAGG GGCCATTTTG CGTAAAGATG GATCGCTTAT TCAGACCCGC
ACCTTTATTG CTCCGCTGAT TGATCAAAGG GGTAAGCAAA CTGGCTGGGT TACCTCATTA
ATTGATATTT CTGAACCTAA AAAGATCCGC GAAGAATTGG CTGCGTCACA GGAACGCTTT
ACCACTGTTC TTGAAGGTCT AGATGCCGCC GTTTCAGTGG TATCCCTTGA GGATGATGAG
CTCTTGTTCG CCAACCGTTT TTATCGCGAG CATTTTGGCA ATGACTCGAA GGGTCACTTT
TTGTTGGCCC ATCAAGAAAA TAGAATTGAG ACACTACATA ACATTGCACA AGATCTTCAA
GATTACATTC GGGATGGCAT CCCTACTTCA TTCCTCTATC AAGAATCGGA ATCTGAAGAA
ATCCAGCTAA GTGATGGCAG CAATAAATGG TATGAAGTAC GACGTCGATA TATTCCTTGG
GTTGATGGGC ATCTAGCGCA ACTACTCATT GCTACTGACA TTACCCCTAG AAAGGTGGCA
GACGACTTAG CGCGCCAGCA AGAAGAGCGC ATGCAATTTA CTAGCCGCCT CACCACTATG
GGTGAAATGG CGTCCTCTCT TGCTCACGAG TTAAACCAAC CACTTTCGGC AATTTCCAAT
TACTGTATGG GTGTAGCTAA GCGCCTGGAG GGAAATATAG ACCCGGCCCT TGGCAAAGAC
ATCTTGCCAG CACTAGAAAA AGCATCGGAT CAAGCGCACC GTGCGGGAAT GATTATTCAA
CGCATTCGAG GATTTGTGAA ACGCAGCGAA CCCCAACGAA AGTCTTTAGC GATTTCGGAA
ATCATTAATG ACGCAGTCGG TTTAGTTGAG ATTGAGGCGC ATCGTCATCG TCTCAGTATC
TCTTCTAATA TCGCGCCCAA TCTTCCTGAG GTTGATGTCG ACCCTGTGCT GATTTTGCAA
GTTTTGGTCA ATTTATTAAA AAATGCCTTA GATAGCACGC GAGAGGCCTA CCCACTCTCC
TCTCGCTGGT CGGCTCCTGT GGTTAATATC AGCGCCGATT TAGACACCAG TATTTTCCCA
GCCATGCTCA AAATTCAGGT AACTGACGGA GGGGCAGGAA TCCCAGAATC CGTCTCTCAG
CGTATGTTTG AGCCCTTTTT CAGCACCAAA TCCGACGGGA TGGGTATGGG CCTCAATATT
TGCCGGTCCA TTATTGAGTC ACACCATGGC CGCCTGTGGG CAATCAATAC CATGGATGCG
GAACATACCA AGCTGTCAGG CTGCACCTTT ACAATACTTC TACCCCTTGA ATCTCCAGAG
ATTAAGGCTG CTGTTTAG
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| Protein sequence | MTLNHMKFSA FSSLLLSPFK WLRKIRGFRL VYTPLLAIVL FTAVMGIILG TLHLQEKNQQ
EAALFRELSF AKQRIQVRFA NNLETLNTIN REIAVSADDT KLKQLAHEQS DDLVINNHEI
VKVLWLNEKY QRQWSAPPST SKPDWIGKTQ NDQAINTALS NAIELSRLTG RAAFSPFLTL
TLPSTDPPVN DRIVFWQVVP NIVGGEAIGF LAALYTTQGI LDIIPGDLKA HYRFTLLADN
ERVLSISSDR DIPKRAFSNQ TSLDIGVLSP NMTLRIDTYP PPTNLTFRML IGVVLGLSAF
VIWSLWSVLK QMQVRQEAEA NLRTETNFRN AMENSTPIGI RAHDMQKRIT YVNRAFCEMT
GWTPNELIGL HPPFPFWPDS RRDELVEKMN RALNSDIDAG MKKGIEGAIL RKDGSLIQTR
TFIAPLIDQR GKQTGWVTSL IDISEPKKIR EELAASQERF TTVLEGLDAA VSVVSLEDDE
LLFANRFYRE HFGNDSKGHF LLAHQENRIE TLHNIAQDLQ DYIRDGIPTS FLYQESESEE
IQLSDGSNKW YEVRRRYIPW VDGHLAQLLI ATDITPRKVA DDLARQQEER MQFTSRLTTM
GEMASSLAHE LNQPLSAISN YCMGVAKRLE GNIDPALGKD ILPALEKASD QAHRAGMIIQ
RIRGFVKRSE PQRKSLAISE IINDAVGLVE IEAHRHRLSI SSNIAPNLPE VDVDPVLILQ
VLVNLLKNAL DSTREAYPLS SRWSAPVVNI SADLDTSIFP AMLKIQVTDG GAGIPESVSQ
RMFEPFFSTK SDGMGMGLNI CRSIIESHHG RLWAINTMDA EHTKLSGCTF TILLPLESPE
IKAAV
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