| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0725 |
|---|
| Symbol | |
|---|
| ID | 5053555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 723609 |
|---|
| End bp | 724310 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640470882 |
|---|
| Product | pirin domain-containing protein |
|---|
| Protein accession | YP_001155507 |
|---|
| Protein GI | 145588910 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGTCC TTAGAAAATC CGCCGATAGA GGTTATGCAG ACCATGGGTG GCTTAAAAGC
TTTCACTCCT TCTCTTTTGC GGGCTACCAT GACCCCAAAT TCATGGGCTG GGGCAATCTC
AGGGTAATCA ATGAAGATCG GGTTGCTGCA GGAATGGGCT TTGGGAAACA TGGCCATAAG
AACATGGAAA TTATTAGCTA TGTTCTCTCA GGAGAATTGG CTCACGAAGA CAGCATGGGA
AATATTAAAG GTATCCCGCC TGGAGATGTA CAGCGCATGA GCGCAGGTAC AGGTGTGGTA
CACAGCGAAT TTAATCACGC AAAAGATCAG ACTACCCATT TTTTACAAAT TTGGATTGAA
CCCAATCAAT TCGATATTGC ACCTGGTTAC GAACAAAAAA CGATTCCTGC AATAGAAAAA
GATGGGGTAC TTCGTTTAGT TGCTTCCCCA GAAGGAAATG ATGGCGCTGT GAAAATCCAT
GCGGATGCTA AGGTGTATGC CGGCCTATTT AATGGACCTC AATCAGCAAC GCATCAGTTA
GACCCGAAGC GCAAGGCATA TGCGCATCTG ATTCGTGGCT CCCTCAATGT CAATGGTCAA
CCATTATCTG AAGGCGATGC TCTGCTTATC GATGGGGAAA CTCAATTAAA AATTGATGGC
GGCAAAGATG CAGAAGTGCT GATTTTTGAC TTGAGTCATT AA
|
|---|
| Protein sequence | MLVLRKSADR GYADHGWLKS FHSFSFAGYH DPKFMGWGNL RVINEDRVAA GMGFGKHGHK
NMEIISYVLS GELAHEDSMG NIKGIPPGDV QRMSAGTGVV HSEFNHAKDQ TTHFLQIWIE
PNQFDIAPGY EQKTIPAIEK DGVLRLVASP EGNDGAVKIH ADAKVYAGLF NGPQSATHQL
DPKRKAYAHL IRGSLNVNGQ PLSEGDALLI DGETQLKIDG GKDAEVLIFD LSH
|
|---|
| |