| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0705 |
|---|
| Symbol | |
|---|
| ID | 5052579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 705052 |
|---|
| End bp | 706404 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640470862 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_001155487 |
|---|
| Protein GI | 145588890 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCTC TAGAAATGGA AAATGAGATG ACTCATTCAC ATAACCCATC ACTTAGCCCA
AGCAACTCCA GCAGCCCACT TTTTGCGCTC GTGGACGTGA ATAACTTCTA TGTTTCTTGC
GAGCGTGTTT TTCAGCCAAA GCTGGAAGAC GTGCCAATGG TAGTGCTCTC GAATAACGAT
GGTTGTGCGG TAGCGCGTAG CGCCGAAGTC AAGGCTTTGG GGATCAAGAC AGGCACTCCT
TGGTTTCAGA TGCAAGAACT TGCTAAGAAG CACGGGATTC AGGCCTACTC TTCGAACTAC
ACCTTATATG GCGATATGAG CTCCCGTGTA GTTGAGGTAT TGCGTGCATT CACGCCCAAT
CTTGAGGTCT ACAGCATCGA TGAGAGTTTT CTGCAAATTG AGACTGTCTT AAAGCAATAT
CAAGACACTG TTGAGCTTGG GCGCAGCATG AAGGAGAAAG TAAGAGATAC CACTGGCTTG
CCTGTTTGCG TAGGTATTGG TGCTAGCAAG ACGCTTGCTA AATTTGCTAA TCACTTAGCC
AAGAAACACC AGCAGTTCGC TGGCGTGTGT GATGTCAATG CGATGCCAAA GGAAGAGTTT
TATCAGTGGA TGAGCGAAAC CTCTGTTGCA GAAGTATGGG GAATTGGTAG ACAGCTGGCC
AAAAAACTCA AAGCGCAGAA TATCCACAGC GTATTTGATC TCTTGCAGGC ATCGCCTCAG
GCAATGCGCC AACAGTATGG CGTAGTGATG GAGCGCCTTT GTTATGAACT GCGCGGAGTG
TCTTGCCTCA AGCTGGAAGA GGTGGCCCCG GCTAAACAAC AGATTATTGC TTCCCGTAGT
TTTGGCAAAC TAGTCACCAA GCTAGAAGAG CTGGCTGAAT CCGTAGCGAT GCATGCTGCC
CGTGCTGCAG AAAAGCTGAG AAGCCAAAAT GGCACTACGG GTGCGCTCAC TGTATTTATT
CAAACCAACC CCTTTAAGCA AAACGAGCCA CAGCACCACC AAAGCATCAC TATTCCGCTT
TCGGATCCAA GTGATAACAC GCTGACCTTA ACGAATGCTG CCCTCAAAGG CTTAAAACAA
ATTTATCAAA GTGGCTTTCG TTACAAGAAG GCTGGCGTCA TCCTCAACCT CATTAGCGAT
AAGCCTACTG CGCAGCAATC TCTGTTTGAA GATATTGAGA CCAAAGGCAA GTCTGCACAT
CTGATGAAGG CGGTAGATGA AATCAACAGT CGCTTTGGTA ATGCGGCGAT CAGATCTGCC
GCTATGGGCA CGAAGCAAGA GTGGCAAATG CGATCAGGTA ACAGGTCACC CAACTACACC
ACGCGTTGGG ATGAGTTACC AGTTGCTAGG TAA
|
|---|
| Protein sequence | MPALEMENEM THSHNPSLSP SNSSSPLFAL VDVNNFYVSC ERVFQPKLED VPMVVLSNND
GCAVARSAEV KALGIKTGTP WFQMQELAKK HGIQAYSSNY TLYGDMSSRV VEVLRAFTPN
LEVYSIDESF LQIETVLKQY QDTVELGRSM KEKVRDTTGL PVCVGIGASK TLAKFANHLA
KKHQQFAGVC DVNAMPKEEF YQWMSETSVA EVWGIGRQLA KKLKAQNIHS VFDLLQASPQ
AMRQQYGVVM ERLCYELRGV SCLKLEEVAP AKQQIIASRS FGKLVTKLEE LAESVAMHAA
RAAEKLRSQN GTTGALTVFI QTNPFKQNEP QHHQSITIPL SDPSDNTLTL TNAALKGLKQ
IYQSGFRYKK AGVILNLISD KPTAQQSLFE DIETKGKSAH LMKAVDEINS RFGNAAIRSA
AMGTKQEWQM RSGNRSPNYT TRWDELPVAR
|
|---|
| |