Gene Pnuc_0702 details

Gene Information

• Locus tag: Pnuc_0702
• Symbol: recR
• ID: 5052096
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 702197
• End bp: 702811
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640470859
• Product: recombination protein RecR
• Protein accession: YP_001155484
• Protein GI: 145588887
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGTG TTGAAGCACC TCAAGATGCT CTTGGTCGTT TGATCGAGGC ATTGCGCGTA 
TTGCCTGGCG TAGGCCCCAA GTCTGCGCAA CGCATGGCAT TTTATTTATT GCAGCATGAT 
CGCAATGGTG CCGCAGTCTT AGCGCAATCA TTGGGTGAGG CCGTAGATAC AGTAGGGCAT 
TGCGCCCGTT GCAATACTTT TTCAGAAACT CAAATCTGTA GCACTTGTGC CGATGGGCGG 
CGGGATCCTT CTTTGCTCTG TATTGTGGAA ACACCAGCAG ACCAAGTGAT GGTCGAGCAA 
ACACTGAGCT TTAAAGGCAA CTATTTTGTA TTGATGGGTC GCATCTCGCC ACTCGATGGT 
ATGGGTCCGA ATGAAATTCA TTTTGATCGT TTGCTCACGC GTATTGAAAA TCCTGATACT 
GGAGTTCCCA TTCGGGAGGT GGTCTTAGCG ACCAACTTCA CTAGCGAAGG CGAGGCTACT 
GCCCATTACA TTGGCGAAGT ACTGAAAGCG AAGGGCATCA AAGTAACTCG CATCGCTAGA 
GGCATTCCAG TGGGCGGCGA GTTGGAGTAT GTTGATGCGG GTACACTTGC TCGCGCCTTA 
ATGGATCGAC GCTAG 

 

Protein sequence

MARVEAPQDA LGRLIEALRV LPGVGPKSAQ RMAFYLLQHD RNGAAVLAQS LGEAVDTVGH 
CARCNTFSET QICSTCADGR RDPSLLCIVE TPADQVMVEQ TLSFKGNYFV LMGRISPLDG 
MGPNEIHFDR LLTRIENPDT GVPIREVVLA TNFTSEGEAT AHYIGEVLKA KGIKVTRIAR 
GIPVGGELEY VDAGTLARAL MDRR