| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0701 |
|---|
| Symbol | |
|---|
| ID | 5052171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 701874 |
|---|
| End bp | 702197 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640470858 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001155483 |
|---|
| Protein GI | 145588886 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG GTGGACTTGC TGGCCTCATG AAACAGGCTC AGCAGATGCA AGAAAAGATG
AAAACCGCGC AAGCCGAATT GGCTGCGTTG GAGGTTAATG GGCAAGCAGC TGGTGGCTTA
GTGAAAGTGG CTATCTCTGG CAAGTATGAG CTCAAGCGCG TACAGATTGA TCCAGGCGCA
ATGGATGATC GTGAGATGTT AGAAGACCTG ATTGTGACCG CCTATACAGA AGCCTTTAAG
CAGGTGGAAG CTGCTAGCAC CCAATTAATG TCTGGTGCTA CCGCTGGCAT GCCAATGCCC
CCTGGATTTA AGCTGCCGTT CTAA
|
|---|
| Protein sequence | MMKGGLAGLM KQAQQMQEKM KTAQAELAAL EVNGQAAGGL VKVAISGKYE LKRVQIDPGA
MDDREMLEDL IVTAYTEAFK QVEAASTQLM SGATAGMPMP PGFKLPF
|
|---|
| |