Gene Pnuc_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0700 
Symbol 
ID5053806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp700148 
End bp701809 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content50% 
IMG OID640470857 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001155482 
Protein GI145588885 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAT TGGCATTAGC CCGCTCGTGG CGCCCCAAAA CATTCTCTGA ATTAGTCGGT 
CAAGACCACG TGGTCAAGGC CTTAACGCAT GCCTTGGATC AGGGCCGCCT GCACCATGCC
TGGCTGTTTA CGGGCACCCG TGGGGTCGGT AAGACCACGA TTGCCCGCAT TATGGCCAAA
GCCCTCAATT GCACTGGAGC TGATGGCTCT GGCAAGATGA CTTCAGAGCC TTGCGGTAAA
TGCCCAGCTT GTATGGAAAT TGATGCAGGC CGCTTTGTTG ATTACATTGA GATGGATGCC
GCCAGTAATC GTGGGGTTGA TGATATTGCC GCTCTTTTAG AAAAAGCTGC TTACGCACCA
AGTAATGGTC GTTATAAGGT TTACATGATT GACGAGGTGC ACATGCTCAC CAATCATGCC
TTTAATGCCA TGCTCAAAAC TTTGGAAGAA CCTCCAGAGC ACGTCAAATT TATTCTAGCC
ACCACTGATC CACAAAAGAT CCCGGTGACT ATTCTGTCAC GCTGCTTGCA GTTCAATCTC
AAGCAAATGC CTGTACCGCT CATCGTGGAG CATTTAGAAA AAGTACTTGC CGCAGAAAAA
GTGGAGTATG AAGTTAATGC TTTGCGTGTC TTAGCTAAAG CTGCCCAAGG CTCTATGCGT
GATGCCTTAT CACTGACTGA TCAAGCCATT GCCTATGCTG CTGGTAAGGT GAGCGAAGAG
TCTGTGCGCG GTATGCTCGG TACATTGGAC GATGCTTACC TCATCCGCAT TTTGGATTGC
TTGATTGCTA AAGACGGTGC AAGTCTATTG TCTGTTGCAA ACGAGATGGG TGAGCGCAGT
ATGTCTTTCT CATTGGCTTT GCAAGACCTG TCTAGCTTGT TGCAAAAGAT TGCAGCAGCA
CAAGTTGTTC CAGAATCTGT ATTAGAAGAT TGGCCAGAGG CAAGTGAGAT TCGTCGCCTG
GCTACGCAGC TCACAAAAGA AGAGGCGCAA CTCTTCTATC AAATTACGAT TACGAGTCGT
CCTGATTTAT CGCTCGCACC AGATGAGCAA ACTGGCTTTG CCATGACGCT CTTGCGGATG
CTAGCGTTTC GTCCAGGCAT TGGTGGAGGA GGTAATTCTT CTCCGGCGCC ATCAGCTCCG
CCCGTAAGCA CTCCTCGTCC GGCAGCATCC GCCCCTAGAG CCGCTACTCC AGCACCTGCT
GCTAGAGTAT CCGCTCCAAC AGCAGCTCCA GTATCTGTAC CTGCCGCTGC AGCTCCAACT
GCGGTAGCAA GCTCAGCTGG GCGTCCTGAT TGGCATGCAT TGATGCGCCA ATTGCCTGTG
CGTGGCTTAG TTCAGCAACT AGCATTTCAG ACAGAGTTAC AAGAGTGGAA TGATTCTGCG
ACTGGTGTAC GTGCCACGAT AGTCACACCA ATGCCTCAGT TGGCTTCGGA GGCATCCGTT
GGTCGTTTGG CGGATGCGCT GACTGCGCAC TTTGGTAAGC CCGTCAAGAT TGTCATTGAG
AAGGGTGAGG TTGAAGGTAA GACTGTTGCC AAAGTAGATG CTCAGATACA TCAGGAAAAA
AGAATGAATG CTGAACAAAT GATTGCAGCT GATCCATTTA TTCAGCAATT AGAAAAAGAG
TTTGGCGCCA AAGTAGTCGG CGGCTCAGTA AAGCCGCTTT AA
 
Protein sequence
MTALALARSW RPKTFSELVG QDHVVKALTH ALDQGRLHHA WLFTGTRGVG KTTIARIMAK 
ALNCTGADGS GKMTSEPCGK CPACMEIDAG RFVDYIEMDA ASNRGVDDIA ALLEKAAYAP
SNGRYKVYMI DEVHMLTNHA FNAMLKTLEE PPEHVKFILA TTDPQKIPVT ILSRCLQFNL
KQMPVPLIVE HLEKVLAAEK VEYEVNALRV LAKAAQGSMR DALSLTDQAI AYAAGKVSEE
SVRGMLGTLD DAYLIRILDC LIAKDGASLL SVANEMGERS MSFSLALQDL SSLLQKIAAA
QVVPESVLED WPEASEIRRL ATQLTKEEAQ LFYQITITSR PDLSLAPDEQ TGFAMTLLRM
LAFRPGIGGG GNSSPAPSAP PVSTPRPAAS APRAATPAPA ARVSAPTAAP VSVPAAAAPT
AVASSAGRPD WHALMRQLPV RGLVQQLAFQ TELQEWNDSA TGVRATIVTP MPQLASEASV
GRLADALTAH FGKPVKIVIE KGEVEGKTVA KVDAQIHQEK RMNAEQMIAA DPFIQQLEKE
FGAKVVGGSV KPL