Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0699 |
Symbol | |
ID | 5052337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 699066 |
End bp | 699722 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470855 |
Product | exonuclease, RNase T and DNA polymerase III |
Protein accession | YP_001155481 |
Protein GI | 145588884 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCAAG CCATTATTTT CGATGTAGAA GCCACTGATA AAAACAATGC CGTCATCATC GAAGCTGCGT CATTAGATGT GACCTCACTC AAACCATTTG AAGTGGGTAA CCCTTGGGTA CAACGCTATA ACCCTGGCAA GCCAATCAGC TTAGGTGCTT TAGCTACCCA CCACATCCTA GATGAAGAGT TAGTGAATTG CCCTGCTAGT AGTTCATTTC GATTGCCGGC TGGAACAAAA TATCTGATTG GTCACAATAT TGATTTTGAT TGGGTTGCCA TTGGCAGCCC TGAAGTAAAG CGTATCTGTA CCTTAGCATT GGCACGCAGC CTTTGGCCCG ATTTAGATAG CCATACTCAA AGTGCGCTGT TGTATTACTT TGAAAGAGAT ACTGCTCGAG ACCAACTGCG GAACGCCCAT AGCGCTTTAG CAGATGTGTG GGTCTGCTCT AAGATTGTTG CTCAAATTAT CAATCAATTG CATCCAATCT CCTTAGATGC TTTATGGGAA ATGTCTGAAA AGGCCAGAAT TCCAACAGTC ATGCCTTATG GAAAACATAA AGGTGAGTTG ATCAGCCAAG TGCCAACAGA CTACAAGCAG TGGCTACTAC GCCAAGACAA TGTGTCTGGA TATCTTCGCA AAGCTTTAGG TGGTTGA
|
Protein sequence | MSQAIIFDVE ATDKNNAVII EAASLDVTSL KPFEVGNPWV QRYNPGKPIS LGALATHHIL DEELVNCPAS SSFRLPAGTK YLIGHNIDFD WVAIGSPEVK RICTLALARS LWPDLDSHTQ SALLYYFERD TARDQLRNAH SALADVWVCS KIVAQIINQL HPISLDALWE MSEKARIPTV MPYGKHKGEL ISQVPTDYKQ WLLRQDNVSG YLRKALGG
|
| |